RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 FOXP1Q9H334 677 aaPredicted RBP5.78□□□□□ -1.48
RIF1-207ENST00000454583 RIC8AQ9NPQ8 531 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 KLF18A0A0U1RQI7 1052 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 VWA5AO00534 786 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 DTNBO60941 627 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 GDF11O95390 407 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 PDE4BQ07343 736 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 TMEM132BQ14DG7 1078 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 SPRYD7Q5W111 196 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 MTRQ99707 1265 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 HDAC9Q9UKV0 1011 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 PPP1R9AQ9ULJ8 1098 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 TRANK1O15050 2925 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 A0A087X0B3 334 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 IGKV6D-21A0A0A0MT36 114 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 IGF2BP3O00425 579 aaKnown RBP eCLIP5.78□□□□□ -1.48
RIF1-207ENST00000454583 CXCL11O14625 94 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 GTPBP6O43824 516 aaPredicted RBP5.78□□□□□ -1.48
RIF1-207ENST00000454583 CALM1P0DP23 149 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 CALM2P0DP24 149 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 CALM3P0DP25 149 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 ZSCAN22P10073 491 aaPredicted RBP5.78□□□□□ -1.48
RIF1-207ENST00000454583 CHADLQ6NUI6 762 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 MOXD1Q6UVY6 613 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 C17orf99Q6UX52 265 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 RCOR1Q9UKL0 485 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 GJD2Q9UKL4 321 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 VAV3Q9UKW4 847 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 CHD9Q3L8U1 2897 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 IQCA1LA6NCM1 817 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 AP5Z1O43299 807 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 GADD45BO75293 160 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 F13A1P00488 732 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TDO2P48775 406 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 MAP3K9P80192 1104 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TCP10Q12799 353 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 IRF5Q13568 498 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 WTAPQ15007 396 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 Q4G0T1 1027 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 NT5DC1Q5TFE4 455 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 PRAMEF18Q5VWM3 479 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 USP17L2Q6R6M4 530 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ZNF784Q8NCA9 323 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 LZTS2Q9BRK4 669 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.77□□□□□ -1.49
RIF1-207ENST00000454583 POLR3EQ9NVU0 708 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 AGTPBP1Q9UPW5 1226 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ADCY6O43306 1168 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ST18O60284 1047 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ICAM1P05362 532 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TAL1P17542 331 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 SPP2Q13103 211 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 PICALMQ13492 652 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TNFAIP1Q13829 316 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 NBR1Q14596 966 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ZSCAN23Q3MJ62 389 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 CCDC84Q86UT8 332 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 SPRYD3Q8NCJ5 442 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 HSD3B7Q9H2F3 369 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 MAP3K20Q9NYL2 800 aaKnown RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 RTEL1Q9NZ71 1219 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ZBTB5O15062 677 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ATG7O95352 703 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TMEM67Q5HYA8 995 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 USP48Q86UV5 1035 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 IGSF22Q8N9C0 903 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 ZNF280CQ8ND82 737 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 PHKBQ93100 1093 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 CPVLQ9H3G5 476 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 GREB1Q4ZG55 1949 aa5.77□□□□□ -1.49
RIF1-207ENST00000454583 TRIP12Q14669 1992 aaPredicted RBP5.77□□□□□ -1.49
RIF1-207ENST00000454583 PNMA6FA0A0J9YX94 578 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 USP17L10C9JJH3 530 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 ASNSP08243 561 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 ZKSCAN1P17029 563 aaPredicted RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 PTMSP20962 102 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 USP5P45974 858 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 MRPS9P82933 396 aaKnown RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 Q3C1V9 767 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 ZNF792Q3KQV3 632 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 NAALADL2Q58DX5 795 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 MUM1L1Q5H9M0 696 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 CCDC83Q8IWF9 413 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 CMTR1Q8N1G2 835 aaKnown RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 STRA6Q9BX79 667 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 GOLPH3LQ9H4A5 285 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 MICAL3Q7RTP6 2002 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 CDH23Q9H251 3354 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 ZBTB43O43298 467 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 DEXIO95424 95 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 SREBF1P36956 1147 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 GRIN1Q05586 938 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 ORC2Q13416 577 aaPredicted RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 SKOR2Q2VWA4 1001 aaPredicted RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 GPATCH4Q5T3I0 446 aaKnown RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 MIGA2Q7L4E1 593 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms