RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PLXNA1Q9UIW2 1896 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 RARBP10826 455 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 ALAS1P13196 640 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 GJC2Q5T442 439 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-203ENST00000454233 RASGRP2Q7LDG7 609 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-203ENST00000454233 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 KRT23Q9C075 422 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 CNNM2Q9H8M5 875 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 ZNF536O15090 1300 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 FRMPD2Q68DX3 1309 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-203ENST00000454233 SYNGAP1Q96PV0 1343 aa12.56□□□□□ -0.4
DDX39A-203ENST00000454233 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 B4E1Z4 1266 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 KDM4AO75164 1064 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 PDHBP11177 359 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 AKR1A1P14550 325 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 SLC16A2P36021 539 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 SNAP25P60880 206 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 SYDE2Q5VT97 1194 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 XPNPEP3Q9NQH7 507 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 CCPG1Q9ULG6 757 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-203ENST00000454233 LAMA4Q16363 1823 aa12.55□□□□□ -0.4
DDX39A-203ENST00000454233 ICAM1P05362 532 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 ZNF865P0CJ78 1059 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 TAL1P17542 331 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 CHMLP26374 656 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 LRRC41Q15345 812 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 LRRC26Q2I0M4 334 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 RNF180Q86T96 592 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 KAT14Q9H8E8 782 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-203ENST00000454233 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 FAM184BQ9ULE4 1060 aa12.54□□□□□ -0.4
DDX39A-203ENST00000454233 ASB14A6NK59 587 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-203ENST00000454233 SYN1P17600 705 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-203ENST00000454233 TRDNQ13061 729 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-203ENST00000454233 IL25Q9H293 177 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ABHD16BQ9H3Z7 469 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 ZSWIM5Q9P217 1185 aa12.53□□□□□ -0.4
DDX39A-203ENST00000454233 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.4
DDX39A-203ENST00000454233 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 PGK1P00558 417 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 SNHG28P0DPA3 235 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 ADCYAP1R1P41586 468 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 CNTN2Q02246 1040 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 NSMFQ6X4W1 530 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 ANKS1AQ92625 1134 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-203ENST00000454233 TNKSO95271 1327 aa12.52□□□□□ -0.41
DDX39A-203ENST00000454233 TRIOBPQ9H2D6 2365 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 SGSM2O43147 1006 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 FXR1P51114 621 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX39A-203ENST00000454233 RTP1P59025 263 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 SLC39A5Q6ZMH5 540 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-203ENST00000454233 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 FGD4Q96M96 766 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 SPC25Q9HBM1 224 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 CYP39A1Q9NYL5 469 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
DDX39A-203ENST00000454233 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 DUSP11O75319 330 aaKnown RBP12.5□□□□□ -0.41
DDX39A-203ENST00000454233 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 BMP8BP34820 402 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-203ENST00000454233 PTH1RQ03431 593 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 ASPRV1Q53RT3 343 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
DDX39A-203ENST00000454233 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
DDX39A-203ENST00000454233 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms