RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ELP1O95163 1332 aa28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 CCDC144BQ3MJ40 725 aa28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 NEDD1Q8NHV4 660 aa28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 NAPBQ9H115 298 aa28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 TTYH1Q9H313 450 aaPredicted RBP28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 HOMER2Q9NSB8 354 aa28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 GREB1LQ9C091 1923 aaPredicted RBP28.23■■■□□ 2.11
LYSMD2-202ENST00000454181 TMEM265A0A087WTH1 108 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 TMEM232C9JQI7 657 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 TIMP1P01033 207 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 FOSL2P15408 326 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 TFAP4Q01664 338 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 GNASQ5JWF2 1037 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 CCDC174Q6PII3 467 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 ARMCX2Q7L311 632 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 CHURC1Q8WUH1 139 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 FSD1Q9BTV5 496 aa28.22■■■□□ 2.11
LYSMD2-202ENST00000454181 TTC41PQ6P2S7 1318 aa28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 ASGR1P07306 291 aa28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 CST5P28325 142 aaPredicted RBP28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 STAT2P52630 851 aa28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 PPP4R3BQ5MIZ7 849 aa28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 CCSAPQ6IQ19 270 aaPredicted RBP28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 NOL8Q76FK4 1167 aaKnown RBP28.21■■■□□ 2.11
LYSMD2-202ENST00000454181 MYADML2A6NDP7 307 aa28.2■■■□□ 2.1
LYSMD2-202ENST00000454181 FAM160B2Q86V87 743 aa28.2■■■□□ 2.1
LYSMD2-202ENST00000454181 CCDC144CPQ8IYA2 1237 aa28.2■■■□□ 2.1
LYSMD2-202ENST00000454181 ACAD9Q9H845 621 aa28.2■■■□□ 2.1
LYSMD2-202ENST00000454181 SLC1A4P43007 532 aa28.19■■■□□ 2.1
LYSMD2-202ENST00000454181 GJA9P57773 515 aa28.19■■■□□ 2.1
LYSMD2-202ENST00000454181 PPARAQ07869 468 aa28.19■■■□□ 2.1
LYSMD2-202ENST00000454181 SEC62Q99442 399 aaKnown RBP28.19■■■□□ 2.1
LYSMD2-202ENST00000454181 A0A0U1RQG5 324 aaPredicted RBP28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 TLR3O15455 904 aaKnown RBP28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 PPIGQ13427 754 aaKnown RBP eCLIP28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 MFSD5Q6N075 450 aa28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 STAG1Q8WVM7 1258 aa28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 UPF3AQ9H1J1 476 aaKnown RBP28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 TBX21Q9UL17 535 aa28.18■■■□□ 2.1
LYSMD2-202ENST00000454181 PLIN4Q96Q06 1357 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 ARVCFO00192 962 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 CHMP4CQ96CF2 233 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 FGD4Q96M96 766 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 RNF146Q9NTX7 359 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 STX8Q9UNK0 236 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 MYH4Q9Y623 1939 aa28.17■■■□□ 2.1
LYSMD2-202ENST00000454181 UNC80Q8N2C7 3258 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 ASB14A6NK59 587 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 MCCP23508 829 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 CDK7P50613 346 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 IRX5P78411 483 aaPredicted RBP28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 CNTN2Q02246 1040 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 TNFAIP2Q03169 654 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 TKFCQ3LXA3 575 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 TMEM199Q8N511 208 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 GMCL1Q96IK5 515 aa28.16■■■□□ 2.1
LYSMD2-202ENST00000454181 TSPY2A6NKD2 308 aa28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 ADCY6O43306 1168 aa28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 DNAJB2P25686 324 aa28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 ZMYM1Q5SVZ6 1142 aa28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 AGBL1Q96MI9 1066 aa28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 ZBTB47Q9UFB7 747 aaPredicted RBP28.15■■■□□ 2.1
LYSMD2-202ENST00000454181 ALAS1P13196 640 aa28.14■■■□□ 2.1
LYSMD2-202ENST00000454181 FAM133AQ8N9E0 248 aa28.14■■■□□ 2.1
LYSMD2-202ENST00000454181 TRERF1Q96PN7 1200 aa28.14■■■□□ 2.1
LYSMD2-202ENST00000454181 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.14■■■□□ 2.1
LYSMD2-202ENST00000454181 A1CFQ9NQ94 594 aaKnown RBP28.14■■■□□ 2.1
LYSMD2-202ENST00000454181 CCDC129Q6ZRS4 1044 aa28.13■■■□□ 2.09
LYSMD2-202ENST00000454181 PI4K2BQ8TCG2 481 aa28.13■■■□□ 2.09
LYSMD2-202ENST00000454181 PPP1R12CQ9BZL4 782 aa28.13■■■□□ 2.09
LYSMD2-202ENST00000454181 AP5M1Q9H0R1 490 aa28.13■■■□□ 2.09
LYSMD2-202ENST00000454181 BEX3Q00994 111 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 RCSD1Q6JBY9 416 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 KCTD1Q719H9 257 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 TIFAQ96CG3 184 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 KATNBL1Q9H079 304 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 ZNF576Q9H609 170 aa28.12■■■□□ 2.09
LYSMD2-202ENST00000454181 ZEB2O60315 1214 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 PLA2G6O60733 806 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 CABYRO75952 493 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 CSF2RAP15509 400 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 GRIN2CQ14957 1233 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 FAM126BQ8IXS8 530 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 MTMR7Q9Y216 660 aa28.11■■■□□ 2.09
LYSMD2-202ENST00000454181 SOWAHBA6NEL2 793 aa28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 RANBP6O60518 1105 aaKnown RBP28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 MX1P20591 662 aa28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 TMEM240Q5SV17 173 aa28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 PSRC1Q6PGN9 363 aaPredicted RBP28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 CXCL17Q6UXB2 119 aa28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 ZNF536O15090 1300 aa28.1■■■□□ 2.09
LYSMD2-202ENST00000454181 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 NKX3-2P78367 333 aa28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 CTDSPL2Q05D32 466 aa28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 FSCN1Q16658 493 aaKnown RBP28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 TLK2Q86UE8 772 aa28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 OTUD7AQ8TE49 926 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms