RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 KRT32Q14532 448 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
VPS16-205ENST00000453689 MAP3K21Q5TCX8 1036 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 CCDC174Q6PII3 467 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
VPS16-205ENST00000453689 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
VPS16-205ENST00000453689 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
VPS16-205ENST00000453689 GOLGA8HP0CJ92 632 aa17.13■□□□□ 0.33
VPS16-205ENST00000453689 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
VPS16-205ENST00000453689 CACNB2Q08289 660 aaPredicted RBP17.13■□□□□ 0.33
VPS16-205ENST00000453689 KCTD2Q14681 263 aa17.13■□□□□ 0.33
VPS16-205ENST00000453689 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.33
VPS16-205ENST00000453689 PAK6Q9NQU5 681 aaPredicted RBP17.13■□□□□ 0.33
VPS16-205ENST00000453689 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
VPS16-205ENST00000453689 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
VPS16-205ENST00000453689 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
VPS16-205ENST00000453689 ALPK3Q96L96 1907 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 ERICH2A1L162 156 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 IGHA2P01877 340 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 PGK2P07205 417 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 GJA8P48165 433 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
VPS16-205ENST00000453689 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
VPS16-205ENST00000453689 WTAPQ15007 396 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
VPS16-205ENST00000453689 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS16-205ENST00000453689 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 SENP2Q9HC62 589 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 HMX1Q9NP08 348 aaPredicted RBP17.12■□□□□ 0.33
VPS16-205ENST00000453689 HOMER2Q9NSB8 354 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
VPS16-205ENST00000453689 TNRC18O15417 2968 aaPredicted RBP17.11■□□□□ 0.33
VPS16-205ENST00000453689 ALAS1P13196 640 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 ANAPC15P60006 121 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 MFSD14CQ5VZR4 134 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 OLFML2BQ68BL8 750 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 IGDCC4Q8TDY8 1250 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
VPS16-205ENST00000453689 MAML3Q96JK9 1138 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 UBA5Q9GZZ9 404 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 CPVLQ9H3G5 476 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 CCPG1Q9ULG6 757 aa17.11■□□□□ 0.33
VPS16-205ENST00000453689 DNAJC25-GNG10A0A024R161 153 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 PRC1O43663 620 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 SGPL1O95470 568 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 ICAM1P05362 532 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
VPS16-205ENST00000453689 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
VPS16-205ENST00000453689 CCND3P30281 292 aaPredicted RBP17.1■□□□□ 0.33
VPS16-205ENST00000453689 CYP2C19P33261 490 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 MCM5P33992 734 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 TKFCQ3LXA3 575 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 DEFB118Q96PH6 123 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 NEK1Q96PY6 1258 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 ACAD9Q9H845 621 aa17.1■□□□□ 0.33
VPS16-205ENST00000453689 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
VPS16-205ENST00000453689 PSMA5P28066 241 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 MUM1L1Q5H9M0 696 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 ANKRD35Q8N283 1001 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 STAG2Q8N3U4 1231 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
VPS16-205ENST00000453689 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
VPS16-205ENST00000453689 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
VPS16-205ENST00000453689 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
VPS16-205ENST00000453689 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
VPS16-205ENST00000453689 ADGRF4Q8IZF3 695 aa17.08■□□□□ 0.32
VPS16-205ENST00000453689 TRPV1Q8NER1 839 aa17.08■□□□□ 0.32
VPS16-205ENST00000453689 TMEM87BQ96K49 555 aa17.08■□□□□ 0.32
VPS16-205ENST00000453689 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
VPS16-205ENST00000453689 A1CFQ9NQ94 594 aaKnown RBP17.08■□□□□ 0.32
VPS16-205ENST00000453689 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
VPS16-205ENST00000453689 MKI67P46013 3256 aaKnown RBP17.07■□□□□ 0.32
VPS16-205ENST00000453689 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 PALM3A6NDB9 673 aaPredicted RBP17.07■□□□□ 0.32
VPS16-205ENST00000453689 SH2B2O14492 632 aaPredicted RBP17.07■□□□□ 0.32
VPS16-205ENST00000453689 CYBAP13498 195 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 TROAPQ12815 778 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 GRM4Q14833 912 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 KIAA1217Q5T5P2 1943 aa17.07■□□□□ 0.32
VPS16-205ENST00000453689 KLRF2D3W0D1 207 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
VPS16-205ENST00000453689 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
VPS16-205ENST00000453689 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms