RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TECP42680 631 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
VTA1-203ENST00000452973 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 RRAGBQ5VZM2 374 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 USP17L10C9JJH3 530 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 NEMFO60524 1076 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 RAD17O75943 681 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 TNNT1P13805 278 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 UBE2SQ16763 222 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
VTA1-203ENST00000452973 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
VTA1-203ENST00000452973 TXKP42681 527 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 TNNI2P48788 182 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 ZNF543Q08ER8 600 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
VTA1-203ENST00000452973 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
VTA1-203ENST00000452973 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 SNAP25P60880 206 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 SEPT2Q15019 361 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 PRMT6Q96LA8 375 aaPredicted RBP13.32□□□□□ -0.28
VTA1-203ENST00000452973 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 CLRN2A0PK11 232 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 ADCY7P51828 1080 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
VTA1-203ENST00000452973 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 CAMKK2Q96RR4 588 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
VTA1-203ENST00000452973 YDJCA8MPS7 323 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 SLC1A4P43007 532 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 GDAQ9Y2T3 454 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
VTA1-203ENST00000452973 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 NOVP48745 357 aa13.31□□□□□ -0.28
VTA1-203ENST00000452973 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
VTA1-203ENST00000452973 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
VTA1-203ENST00000452973 PPP1R11O60927 126 aaPredicted RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 TDP2O95551 362 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 C7orf43Q8WVR3 580 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 GJA10Q969M2 543 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 ADKP55263 362 aaKnown RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
VTA1-203ENST00000452973 CABP7Q86V35 215 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
VTA1-203ENST00000452973 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
VTA1-203ENST00000452973 NRDCO43847 1150 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 ZNF18P17022 549 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 PLCG1P19174 1290 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 ICA1Q05084 483 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 MYH8P13535 1937 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 TEX33O43247 280 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 SLC37A4O43826 429 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
VTA1-203ENST00000452973 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
VTA1-203ENST00000452973 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 LRRC15Q8TF66 581 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 PRIMPOLQ96LW4 560 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
VTA1-203ENST00000452973 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
VTA1-203ENST00000452973 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms