RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 FERMT2Q96AC1 680 aa25.88■■□□□ 1.73
CPSF7-208ENST00000450000 RNF146Q9NTX7 359 aa25.88■■□□□ 1.73
CPSF7-208ENST00000450000 MYH4Q9Y623 1939 aa25.87■■□□□ 1.73
CPSF7-208ENST00000450000 COL11A1P12107 1806 aaPredicted RBP25.87■■□□□ 1.73
CPSF7-208ENST00000450000 PARP14Q460N5 1801 aa25.87■■□□□ 1.73
CPSF7-208ENST00000450000 FGRP09769 529 aa25.87■■□□□ 1.73
CPSF7-208ENST00000450000 TAL1P17542 331 aaPredicted RBP25.87■■□□□ 1.73
CPSF7-208ENST00000450000 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
CPSF7-208ENST00000450000 AKNAD1Q5T1N1 836 aa25.87■■□□□ 1.73
CPSF7-208ENST00000450000 DNAJC25-GNG10A0A024R161 153 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 PGK1P00558 417 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 ZNF865P0CJ78 1059 aaPredicted RBP25.86■■□□□ 1.73
CPSF7-208ENST00000450000 MAMDC4Q6UXC1 1216 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 ESR2Q92731 530 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 AGBL1Q96MI9 1066 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 TRERF1Q96PN7 1200 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 SPC25Q9HBM1 224 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 PRDM5Q9NQX1 630 aaPredicted RBP25.86■■□□□ 1.73
CPSF7-208ENST00000450000 TCP11L1Q9NUJ3 509 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 PRR12Q9ULL5 1215 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 TRIOBPQ9H2D6 2365 aa25.86■■□□□ 1.73
CPSF7-208ENST00000450000 TDHQ8IZJ6 230 aa25.85■■□□□ 1.73
CPSF7-208ENST00000450000 TMEM47Q9BQJ4 181 aa25.85■■□□□ 1.73
CPSF7-208ENST00000450000 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.85■■□□□ 1.73
CPSF7-208ENST00000450000 CCPG1Q9ULG6 757 aa25.85■■□□□ 1.73
CPSF7-208ENST00000450000 SNAP25P60880 206 aa25.84■■□□□ 1.73
CPSF7-208ENST00000450000 ACVR2BQ13705 512 aa25.84■■□□□ 1.73
CPSF7-208ENST00000450000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.84■■□□□ 1.73
CPSF7-208ENST00000450000 TTC14Q96N46 770 aa25.84■■□□□ 1.73
CPSF7-208ENST00000450000 ABHD16BQ9H3Z7 469 aa25.84■■□□□ 1.73
CPSF7-208ENST00000450000 TACC3Q9Y6A5 838 aa25.84■■□□□ 1.73
CPSF7-208ENST00000450000 SNAI1O95863 264 aaPredicted RBP25.83■■□□□ 1.73
CPSF7-208ENST00000450000 GPCPD1Q9NPB8 672 aa25.83■■□□□ 1.73
CPSF7-208ENST00000450000 CTNNA3Q9UI47 895 aa25.83■■□□□ 1.73
CPSF7-208ENST00000450000 ALPK3Q96L96 1907 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 ASB14A6NK59 587 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 TRIM60Q495X7 471 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 CCDC178Q5BJE1 867 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 SYDE2Q5VT97 1194 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 NOL8Q76FK4 1167 aaKnown RBP25.82■■□□□ 1.72
CPSF7-208ENST00000450000 ARMCX2Q7L311 632 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 IQCA1Q86XH1 822 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 PHF24Q9UPV7 400 aa25.82■■□□□ 1.72
CPSF7-208ENST00000450000 FRMPD2Q68DX3 1309 aaPredicted RBP25.82■■□□□ 1.72
CPSF7-208ENST00000450000 SLC16A2P36021 539 aa25.81■■□□□ 1.72
CPSF7-208ENST00000450000 NOVP48745 357 aa25.81■■□□□ 1.72
CPSF7-208ENST00000450000 NT5C2P49902 561 aa25.81■■□□□ 1.72
CPSF7-208ENST00000450000 IMMTQ16891 758 aaKnown RBP25.81■■□□□ 1.72
CPSF7-208ENST00000450000 NSMFQ6X4W1 530 aa25.81■■□□□ 1.72
CPSF7-208ENST00000450000 NUP133Q8WUM0 1156 aa25.81■■□□□ 1.72
CPSF7-208ENST00000450000 A1CFQ9NQ94 594 aaKnown RBP25.81■■□□□ 1.72
CPSF7-208ENST00000450000 DUSP11O75319 330 aaKnown RBP25.8■■□□□ 1.72
CPSF7-208ENST00000450000 CNTN2Q02246 1040 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 RASGRP2Q7LDG7 609 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 TBC1D10CQ8IV04 446 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 CCDC144CPQ8IYA2 1237 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 VTI1AQ96AJ9 217 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 LENG1Q96BZ8 264 aaPredicted RBP25.8■■□□□ 1.72
CPSF7-208ENST00000450000 TSEN34Q9BSV6 310 aaKnown RBP25.8■■□□□ 1.72
CPSF7-208ENST00000450000 PNMA2Q9UL42 364 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 ZNF536O15090 1300 aa25.8■■□□□ 1.72
CPSF7-208ENST00000450000 ZNFX1Q9P2E3 1918 aaKnown RBP25.8■■□□□ 1.72
CPSF7-208ENST00000450000 FRMPD3Q5JV73 1810 aa25.79■■□□□ 1.72
CPSF7-208ENST00000450000 ICAM1P05362 532 aa25.79■■□□□ 1.72
CPSF7-208ENST00000450000 C6orf222P0C671 652 aaPredicted RBP25.79■■□□□ 1.72
CPSF7-208ENST00000450000 CCDC144BQ3MJ40 725 aa25.79■■□□□ 1.72
CPSF7-208ENST00000450000 TTBK2Q6IQ55 1244 aa25.79■■□□□ 1.72
CPSF7-208ENST00000450000 STARD7Q9NQZ5 370 aa25.79■■□□□ 1.72
CPSF7-208ENST00000450000 MOXD2PA6NHM9 499 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 IRX6P78412 446 aaPredicted RBP25.78■■□□□ 1.72
CPSF7-208ENST00000450000 FAM133AQ8N9E0 248 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 PCSK9Q8NBP7 692 aaKnown RBP25.78■■□□□ 1.72
CPSF7-208ENST00000450000 LRCH3Q96II8 777 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 ZKSCAN3Q9BRR0 538 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 DSCC1Q9BVC3 393 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 RANBP17Q9H2T7 1088 aaKnown RBP25.78■■□□□ 1.72
CPSF7-208ENST00000450000 SYNRGQ9UMZ2 1314 aa25.78■■□□□ 1.72
CPSF7-208ENST00000450000 A0A1W2PQ45 241 aaPredicted RBP25.77■■□□□ 1.72
CPSF7-208ENST00000450000 A0A1W2PQY0 241 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 ADAMTS4O75173 837 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 ACLYP53396 1101 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 SNX17Q15036 470 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 C1orf53Q5VUE5 145 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 BTNL9Q6UXG8 535 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 GLT1D1Q96MS3 346 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 KAT14Q9H8E8 782 aa25.77■■□□□ 1.72
CPSF7-208ENST00000450000 SOX1O00570 391 aaPredicted RBP25.76■■□□□ 1.71
CPSF7-208ENST00000450000 KDM4AO75164 1064 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 PDHBP11177 359 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 TLE2Q04725 743 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 KCNA10Q16322 511 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 LRIT3Q3SXY7 679 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 MUM1L1Q5H9M0 696 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 DGKHQ86XP1 1220 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 RUFY2Q8WXA3 655 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 ADD3Q9UEY8 706 aaKnown RBP25.76■■□□□ 1.71
CPSF7-208ENST00000450000 NEDD4P46934 1319 aa25.76■■□□□ 1.71
CPSF7-208ENST00000450000 PLXNA1Q9UIW2 1896 aa25.75■■□□□ 1.71
CPSF7-208ENST00000450000 PQBP1O60828 265 aaKnown RBP25.75■■□□□ 1.71
CPSF7-208ENST00000450000 TNFAIP2Q03169 654 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms