RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 MB21D1Q8N884 522 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 STIM1Q13586 685 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 OR8K1Q8NGG5 319 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 H7C1D1 291 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 FGRP09769 529 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 TNNT3P45378 269 aaPredicted RBP12.7□□□□□ -0.38
SYVN1-204ENST00000449943 KLK7P49862 253 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 RCSD1Q6JBY9 416 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 IRF2BP1Q8IU81 584 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 TRIM21P19474 475 aaKnown RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 GDAP1L1Q96MZ0 367 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 TMOD2Q9NZR1 351 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 MAP2K7O14733 419 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 PSMA7O14818 248 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ZSCAN26Q16670 478 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 C4orf32Q8N8J7 132 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 TXNRD3Q86VQ6 643 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
SYVN1-204ENST00000449943 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
SYVN1-204ENST00000449943 ZMYND10O75800 440 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 ATP1A1P05023 1023 aaKnown RBP12.68□□□□□ -0.38
SYVN1-204ENST00000449943 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 FECHP22830 423 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 RPS8P62241 208 aaKnown RBP12.68□□□□□ -0.38
SYVN1-204ENST00000449943 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
SYVN1-204ENST00000449943 CASP8Q14790 479 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 IL17RBQ9NRM6 502 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 PCDHA6Q9UN73 950 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 PCDHA8Q9Y5H6 950 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 MACROD2A1Z1Q3 448 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 MTIF2P46199 727 aaKnown RBP12.68□□□□□ -0.38
SYVN1-204ENST00000449943 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 TAF1P21675 1872 aa12.68□□□□□ -0.38
SYVN1-204ENST00000449943 ERCC3P19447 782 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 HERVK_113P62684 666 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 ASIC1P78348 528 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 PDE4DQ08499 809 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 HNRNPLLQ8WVV9 542 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 HPS3Q969F9 1004 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CACNA1SQ13698 1873 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 TUBGCP2Q9BSJ2 902 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 ZNHIT6Q9NWK9 470 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 MYO1AQ9UBC5 1043 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 MYH8P13535 1937 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 GNPATO15228 680 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CAPN2P17655 700 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 PLCG1P19174 1290 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 GSTO1P78417 241 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 RAD51AP2Q09MP3 1159 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 MMS19Q96T76 1030 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
SYVN1-204ENST00000449943 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
SYVN1-204ENST00000449943 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms