RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 MYH6P13533 1939 aa14□□□□□ -0.17
LSP1P3-201ENST00000449530 ZNF536O15090 1300 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 E7EWF7 191 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 FARP2O94887 1054 aaPredicted RBP13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 GOLGA8HP0CJ92 632 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 TAL1P17542 331 aaPredicted RBP13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 ZNF543Q08ER8 600 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 OLFML2BQ68BL8 750 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 LCTP09848 1927 aa13.99□□□□□ -0.17
LSP1P3-201ENST00000449530 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 SMCHD1A6NHR9 2005 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 MCM3APO60318 1980 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 TFRCP02786 760 aaKnown RBP13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 SNHG28P0DPA3 235 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 ALAS1P13196 640 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 IFIT1BQ5T764 474 aaKnown RBP13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 BTNL9Q6UXG8 535 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 NCOA7Q8NI08 942 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 CRISPLD2Q9H0B8 497 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 RANBP17Q9H2T7 1088 aaKnown RBP13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 FBXO40Q9UH90 709 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
LSP1P3-201ENST00000449530 H0YGN5 161 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 CYBAP13498 195 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 CNGA1P29973 690 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 SEC23AQ15436 765 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 ANKRD35Q8N283 1001 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 TRPV1Q8NER1 839 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 CHST13Q8NET6 341 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 CPVLQ9H3G5 476 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 ACAD9Q9H845 621 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
LSP1P3-201ENST00000449530 ERICH2A1L162 156 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 IFIT3O14879 490 aaKnown RBP13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 SLC27A2O14975 620 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 IGHA2P01877 340 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 ICAM1P05362 532 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 DIS3LQ8TF46 1054 aaKnown RBP13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 TRERF1Q96PN7 1200 aa13.96□□□□□ -0.17
LSP1P3-201ENST00000449530 CEP290O15078 2479 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 DNAJC25-GNG10A0A024R161 153 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 ANTXR2P58335 489 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 WTAPQ15007 396 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 SART3Q15020 963 aaKnown RBP13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 TKFCQ3LXA3 575 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 MUM1L1Q5H9M0 696 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 PRAMEF19Q5SWL8 479 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 UBE2Q1Q7Z7E8 422 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 SENP2Q9HC62 589 aa13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 DDX20Q9UHI6 824 aaKnown RBP13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 DIS3Q9Y2L1 958 aaKnown RBP13.95□□□□□ -0.18
LSP1P3-201ENST00000449530 PFASO15067 1338 aa13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 DHX16O60231 1041 aaKnown RBP13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 NECTIN1Q15223 517 aa13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 ANKLE1Q8NAG6 615 aa13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
LSP1P3-201ENST00000449530 COL6A3P12111 3177 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 PRC1O43663 620 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 CAPN2P17655 700 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 USH1GQ495M9 461 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 RNF20Q5VTR2 975 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 LHX8Q68G74 356 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 PAWRQ96IZ0 340 aaKnown RBP13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 FGD4Q96M96 766 aa13.93□□□□□ -0.18
LSP1P3-201ENST00000449530 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 NFIBO00712 420 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 SEPT4O43236 478 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 MSCO60682 206 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 CNTN2Q02246 1040 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 GRM4Q14833 912 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms