RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 REXO1Q8N1G1 1221 aaKnown RBP11.07□□□□□ -0.64
RFC4-210ENST00000449502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFC4-210ENST00000449502 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
RFC4-210ENST00000449502 GPT2Q8TD30 523 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 ZBED4O75132 1171 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 FLOT1O75955 427 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 BACE1P56817 501 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 SNAP25P60880 206 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 ZNF174Q15697 407 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 USH1GQ495M9 461 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 CCDC183Q5T5S1 534 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 JAKMIP3Q5VZ66 844 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 ADALQ6DHV7 355 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 ANKRD13AQ8IZ07 590 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 FSIP1Q8NA03 581 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 MRPS27Q92552 414 aaKnown RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 SLF1Q9BQI6 1058 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 RIC8AQ9NPQ8 531 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
RFC4-210ENST00000449502 MRPL11Q9Y3B7 192 aaKnown RBP11.06□□□□□ -0.64
RFC4-210ENST00000449502 A0A1W2PQ27 194 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 A0A1W2PQ64 194 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 A0A1W2PQD8 194 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 CUTAO60888 179 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 FDX1P10109 184 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 VGLL4Q14135 290 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
RFC4-210ENST00000449502 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 TNFRSF25Q93038 417 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
RFC4-210ENST00000449502 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
RFC4-210ENST00000449502 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 PCDHA7Q9UN72 937 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
RFC4-210ENST00000449502 CDK5RAP2Q96SN8 1893 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 MARCH6O60337 910 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 KINO60870 393 aaKnown RBP11.04□□□□□ -0.64
RFC4-210ENST00000449502 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
RFC4-210ENST00000449502 VCAM1P19320 739 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 MCM7P33993 719 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
RFC4-210ENST00000449502 HMGCS2P54868 508 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 GSE1Q14687 1217 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 NPY5RQ15761 445 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 KIAA1755Q5JYT7 1200 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 NEK8Q86SG6 692 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 TEX2Q8IWB9 1127 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 PGBD1Q96JS3 809 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
RFC4-210ENST00000449502 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 PCDHB6Q9Y5E3 794 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 ABCB11O95342 1321 aa11.04□□□□□ -0.64
RFC4-210ENST00000449502 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L15C9J2P7 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L13C9JLJ4 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L11C9JVI0 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L18D6R9N7 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L22D6RA61 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L17D6RBQ6 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L19D6RCP7 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L20D6RJB6 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
RFC4-210ENST00000449502 FOSP01100 380 aaPredicted RBP11.03□□□□□ -0.64
RFC4-210ENST00000449502 PPATQ06203 517 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 USP17L24Q0WX57 530 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 AP3B2Q13367 1082 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 PTPAQ15257 358 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 INF2Q27J81 1249 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 ZSCAN23Q3MJ62 389 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
RFC4-210ENST00000449502 MAP1SQ66K74 1059 aaPredicted RBP11.03□□□□□ -0.64
RFC4-210ENST00000449502 DLK2Q6UY11 383 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
RFC4-210ENST00000449502 ERO1BQ86YB8 467 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 MCF2L2Q86YR7 1114 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 TBCKQ8TEA7 893 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 NUP62CLQ9H1M0 184 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 PPP1R9AQ9ULJ8 1098 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms