RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
SRRT-205ENST00000449389 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SRRT-205ENST00000449389 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
SRRT-205ENST00000449389 PGK1P00558 417 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
SRRT-205ENST00000449389 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
SRRT-205ENST00000449389 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 HOMER2Q9NSB8 354 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 RNF146Q9NTX7 359 aa12.77□□□□□ -0.37
SRRT-205ENST00000449389 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
SRRT-205ENST00000449389 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
SRRT-205ENST00000449389 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 ADAMTS4O75173 837 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 IGHDP01880 384 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 TOP1P11387 765 aaKnown RBP12.76□□□□□ -0.37
SRRT-205ENST00000449389 SDSP20132 328 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 ACVR2BQ13705 512 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 CCDC96Q2M329 555 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
SRRT-205ENST00000449389 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
SRRT-205ENST00000449389 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 FGD4Q96M96 766 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
SRRT-205ENST00000449389 ABHD16BQ9H3Z7 469 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 A1CFQ9NQ94 594 aaKnown RBP12.76□□□□□ -0.37
SRRT-205ENST00000449389 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 PRR12Q9ULL5 1215 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 ZNF536O15090 1300 aa12.76□□□□□ -0.37
SRRT-205ENST00000449389 A0A1W2PQ45 241 aaPredicted RBP12.75□□□□□ -0.37
SRRT-205ENST00000449389 A0A1W2PQY0 241 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 DUSP11O75319 330 aaKnown RBP12.75□□□□□ -0.37
SRRT-205ENST00000449389 ALAS1P13196 640 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 HAND2P61296 217 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
SRRT-205ENST00000449389 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
SRRT-205ENST00000449389 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 DIAPH3Q9NSV4 1193 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
SRRT-205ENST00000449389 SMCHD1A6NHR9 2005 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 MOXD2PA6NHM9 499 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 ASB14A6NK59 587 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 HIP1O00291 1037 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 NT5C2P49902 561 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 ACLYP53396 1101 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 TLE2Q04725 743 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 KLHDC9Q8NEP7 349 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 TTC14Q96N46 770 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 CCPG1Q9ULG6 757 aa12.74□□□□□ -0.37
SRRT-205ENST00000449389 ICAM1P05362 532 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 CST5P28325 142 aaPredicted RBP12.73□□□□□ -0.37
SRRT-205ENST00000449389 SNAP25P60880 206 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
SRRT-205ENST00000449389 ESR2Q92731 530 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 KATNBL1Q9H079 304 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 UPF3AQ9H1J1 476 aaKnown RBP12.73□□□□□ -0.37
SRRT-205ENST00000449389 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
SRRT-205ENST00000449389 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 PNMA2Q9UL42 364 aa12.73□□□□□ -0.37
SRRT-205ENST00000449389 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 ZNF213O14771 459 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 CLTBP09497 229 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
SRRT-205ENST00000449389 SLC16A2P36021 539 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 GJA9P57773 515 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 KCNA10Q16322 511 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 CCSAPQ6IQ19 270 aaPredicted RBP12.72□□□□□ -0.37
SRRT-205ENST00000449389 TTBK2Q6IQ55 1244 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
SRRT-205ENST00000449389 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 GLT1D1Q96MS3 346 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 TOX2Q96NM4 488 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
SRRT-205ENST00000449389 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms