RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TRAF1Q13077 416 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 SNAPC2Q13487 334 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 TEX2Q8IWB9 1127 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 KCNJ14Q9UNX9 436 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 FLOT1O75955 427 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 FOSBP53539 338 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 SAFBQ15424 915 aaKnown RBP eCLIP22.18■■□□□ 1.14
RPS28-202ENST00000449223 FASTKD5Q7L8L6 764 aaKnown RBP22.18■■□□□ 1.14
RPS28-202ENST00000449223 BRAPQ7Z569 592 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 SAPCD2Q86UD0 394 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 KIFC2Q96AC6 838 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 AMNQ9BXJ7 453 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 SLC38A10Q9HBR0 1119 aa22.18■■□□□ 1.14
RPS28-202ENST00000449223 YY1P25490 414 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 HUNKP57058 714 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 COG2Q14746 738 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 FERMT3Q86UX7 667 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 DIS3L2Q8IYB7 885 aaKnown RBP22.17■■□□□ 1.14
RPS28-202ENST00000449223 ZNF784Q8NCA9 323 aaPredicted RBP22.17■■□□□ 1.14
RPS28-202ENST00000449223 PNMA2Q9UL42 364 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 AGTPBP1Q9UPW5 1226 aa22.17■■□□□ 1.14
RPS28-202ENST00000449223 M0R2N6 131 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 DSG3P32926 999 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 NAPAP54920 295 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 TREML2Q5T2D2 321 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 SPRYD7Q5W111 196 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 FBXO11Q86XK2 927 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 MS4A4AQ96JQ5 239 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 BRMS1Q9HCU9 246 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 COL11A1P12107 1806 aaPredicted RBP22.16■■□□□ 1.14
RPS28-202ENST00000449223 ZNF536O15090 1300 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 KIF28PB7ZC32 967 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 GNA11P29992 359 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 KRT2P35908 639 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 GTF2A2P52657 109 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 NLRP5P59047 1200 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 FOXD4L5Q5VV16 416 aaPredicted RBP22.16■■□□□ 1.14
RPS28-202ENST00000449223 LBX2Q6XYB7 198 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 FOXD4L4Q8WXT5 416 aaPredicted RBP22.16■■□□□ 1.14
RPS28-202ENST00000449223 TNFRSF25Q93038 417 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 HHIPL1Q96JK4 782 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 HOXC10Q9NYD6 342 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 PCDHA4Q9UN74 947 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 PCDHA1Q9Y5I3 950 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 TLL2Q9Y6L7 1015 aa22.16■■□□□ 1.14
RPS28-202ENST00000449223 BTBD18B2RXH4 712 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 VWA5AO00534 786 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 ATP2A1O14983 1001 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 ICAM1P05362 532 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 MCTP1Q6DN14 999 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 NOSTRINQ8IVI9 506 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 REPS2Q8NFH8 660 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 COA7Q96BR5 231 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 GLT8D2Q9H1C3 349 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 SLC45A1Q9Y2W3 748 aa22.15■■□□□ 1.14
RPS28-202ENST00000449223 TCHHQ07283 1943 aa22.14■■□□□ 1.14
RPS28-202ENST00000449223 CETPP11597 493 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 OAZ1P54368 228 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 ATL3Q6DD88 541 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 GPAT2Q6NUI2 795 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 BLIDQ8IZY5 108 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 BICD2Q8TD16 824 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 C6orf50Q9HD87 102 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 SMCHD1A6NHR9 2005 aa22.14■■□□□ 1.13
RPS28-202ENST00000449223 SMCO2A6NFE2 343 aa22.13■■□□□ 1.13
RPS28-202ENST00000449223 SPDYE16A6NNV3 312 aaPredicted RBP22.13■■□□□ 1.13
RPS28-202ENST00000449223 PABPC4Q13310 644 aaKnown RBP eCLIP22.13■■□□□ 1.138e-9■■□□□ 14.3
RPS28-202ENST00000449223 GADL1Q6ZQY3 521 aa22.13■■□□□ 1.13
RPS28-202ENST00000449223 ATG4CQ96DT6 458 aa22.13■■□□□ 1.13
RPS28-202ENST00000449223 GBP4Q96PP9 640 aa22.13■■□□□ 1.13
RPS28-202ENST00000449223 RIC8AQ9NPQ8 531 aa22.13■■□□□ 1.13
RPS28-202ENST00000449223 BAG4O95429 457 aaKnown RBP22.12■■□□□ 1.13
RPS28-202ENST00000449223 NR5A1Q13285 461 aa22.12■■□□□ 1.13
RPS28-202ENST00000449223 RGMBQ6NW40 437 aa22.12■■□□□ 1.13
RPS28-202ENST00000449223 RASAL3Q86YV0 1011 aa22.12■■□□□ 1.13
RPS28-202ENST00000449223 OXER1Q8TDS5 423 aa22.12■■□□□ 1.13
RPS28-202ENST00000449223 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.12■■□□□ 1.13
RPS28-202ENST00000449223 ABCB11O95342 1321 aa22.12■■□□□ 1.13
RPS28-202ENST00000449223 TESPA1A2RU30 521 aaPredicted RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 TMEM88BA6NKF7 163 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 ZBED4O75132 1171 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 SNAP25P60880 206 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 MYSM1Q5VVJ2 828 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 MB21D1Q8N884 522 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 RBBP6Q7Z6E9 1792 aaKnown RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 CLK2P49760 499 aaKnown RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 ADCY7P51828 1080 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 GNL2Q13823 731 aaKnown RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 CUL5Q93034 780 aa22.11■■□□□ 1.13
RPS28-202ENST00000449223 ASCC2Q9H1I8 757 aaPredicted RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 ZNF214Q9UL59 606 aaPredicted RBP22.11■■□□□ 1.13
RPS28-202ENST00000449223 OPLAHO14841 1288 aa22.1■■□□□ 1.13
RPS28-202ENST00000449223 SLC10A3P09131 477 aa22.1■■□□□ 1.13
RPS28-202ENST00000449223 MRPL12P52815 198 aaKnown RBP22.1■■□□□ 1.13
RPS28-202ENST00000449223 GHRHRQ02643 423 aa22.1■■□□□ 1.13
RPS28-202ENST00000449223 ANKRD23Q86SG2 305 aa22.1■■□□□ 1.13
RPS28-202ENST00000449223 PSTPIP2Q9H939 334 aa22.1■■□□□ 1.13
RPS28-202ENST00000449223 CCL15-CCL14A0A0B4J2E2 113 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 PIK3CDO00329 1044 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 ADAMTS3O15072 1205 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms