RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 LCTP09848 1927 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 ZBED4O75132 1171 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 PLEKHA8P1O95397 391 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 ARHGEF6Q15052 776 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 SNRNP48Q6IEG0 339 aaKnown RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 ADGRF4Q8IZF3 695 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 CMTR1Q8N1G2 835 aaKnown RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 CTCFLQ8NI51 663 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 RANBP17Q9H2T7 1088 aaKnown RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
SMPD4-211ENST00000449159 NAP1L2Q9ULW6 460 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-211ENST00000449159 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
SMPD4-211ENST00000449159 TNPO2O14787 897 aaKnown RBP12.38□□□□□ -0.43
SMPD4-211ENST00000449159 ZBTB43O43298 467 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 CYTH3O43739 400 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
SMPD4-211ENST00000449159 ERCC3P19447 782 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 STAT3P40763 770 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 FCGRTP55899 365 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 CCNA1P78396 465 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 KIF22Q14807 665 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 MAP3K14Q99558 947 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 JMJD4Q9H9V9 463 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
SMPD4-211ENST00000449159 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 GABRQQ9UN88 632 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
SMPD4-211ENST00000449159 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-211ENST00000449159 GOLGA8AA7E2F4 631 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 CALM1P0DP23 149 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 CALM2P0DP24 149 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 CALM3P0DP25 149 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-211ENST00000449159 CDC27P30260 824 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 MAPK4P31152 587 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 KIF5BP33176 963 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 NEK4P51957 841 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 OAZ1P54368 228 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 AK2P54819 239 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 CDC37Q16543 378 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-211ENST00000449159 SYNE3Q6ZMZ3 975 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
SMPD4-211ENST00000449159 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
SMPD4-211ENST00000449159 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-211ENST00000449159 PTCH2Q9Y6C5 1203 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 NID2Q14112 1375 aa12.37□□□□□ -0.43
SMPD4-211ENST00000449159 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 ICAM1P05362 532 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 FDX1P10109 184 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 PDIA3P30101 505 aaKnown RBP12.36□□□□□ -0.43
SMPD4-211ENST00000449159 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMPD4-211ENST00000449159 EVCP57679 992 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 PRKCZQ05513 592 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 RTN1Q16799 776 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 TMTC3Q6ZXV5 915 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 PLEKHH3Q7Z736 793 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
SMPD4-211ENST00000449159 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 SHCBP1Q8NEM2 672 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 PIGSQ96S52 555 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 CWC22Q9HCG8 908 aaKnown RBP12.36□□□□□ -0.43
SMPD4-211ENST00000449159 SRRDQ9UH36 339 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 MCM3APO60318 1980 aa12.36□□□□□ -0.43
SMPD4-211ENST00000449159 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-211ENST00000449159 SLC25A27O95847 323 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 ALAS1P13196 640 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
SMPD4-211ENST00000449159 FLT3LGP49771 235 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 RCAN1P53805 252 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
SMPD4-211ENST00000449159 USH1GQ495M9 461 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 COA7Q96BR5 231 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 ALDH8A1Q9H2A2 487 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms