RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 TRIM43Q96BQ3 446 aaPredicted RBP27.54■■■□□ 2
R3HDM2-208ENST00000448732 ABHD16BQ9H3Z7 469 aa27.54■■■□□ 2
R3HDM2-208ENST00000448732 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.54■■■□□ 2
R3HDM2-208ENST00000448732 ZHX1Q9UKY1 873 aaPredicted RBP27.54■■■□□ 2
R3HDM2-208ENST00000448732 SYNRGQ9UMZ2 1314 aa27.53■■■□□ 2
R3HDM2-208ENST00000448732 ORC4O43929 436 aa27.53■■■□□ 2
R3HDM2-208ENST00000448732 NMT2O60551 498 aa27.53■■■□□ 2
R3HDM2-208ENST00000448732 AAMPQ13685 434 aa27.53■■■□□ 2
R3HDM2-208ENST00000448732 MCMDC2Q4G0Z9 681 aa27.53■■■□□ 2
R3HDM2-208ENST00000448732 CCSAPQ6IQ19 270 aaPredicted RBP27.53■■■□□ 2
R3HDM2-208ENST00000448732 ISY1Q9ULR0 285 aaKnown RBP27.53■■■□□ 2
R3HDM2-208ENST00000448732 POTEB2H3BUK9 544 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 RANBP6O60518 1105 aaKnown RBP27.52■■■□□ 2
R3HDM2-208ENST00000448732 ACLYP53396 1101 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 TKFCQ3LXA3 575 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 FAM227BQ96M60 508 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 AGBL1Q96MI9 1066 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 ACAD9Q9H845 621 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 HOMER2Q9NSB8 354 aa27.52■■■□□ 2
R3HDM2-208ENST00000448732 MOXD2PA6NHM9 499 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 FGAP02671 866 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 IKQ13123 557 aaPredicted RBP27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 FAM109BQ6ICB4 259 aaPredicted RBP27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 KCTD1Q719H9 257 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 ARMCX2Q7L311 632 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 FAM133AQ8N9E0 248 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 NUP133Q8WUM0 1156 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 CHMP4CQ96CF2 233 aa27.51■■□□□ 1.99
R3HDM2-208ENST00000448732 A0A0D9SFI3 127 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 CLTBP09497 229 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 CNTN2Q02246 1040 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 SHHQ15465 462 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 KCNA10Q16322 511 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 CCDC144BQ3MJ40 725 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 SLC17A8Q8NDX2 589 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 RNF146Q9NTX7 359 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 STXBP5LQ9Y2K9 1186 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 COL6A3P12111 3177 aa27.5■■□□□ 1.99
R3HDM2-208ENST00000448732 MCM3APO60318 1980 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 CST5P28325 142 aaPredicted RBP27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 ANKRD33Q7Z3H0 272 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 CCDC144CPQ8IYA2 1237 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 TOX2Q96NM4 488 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 KATNBL1Q9H079 304 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 A1CFQ9NQ94 594 aaKnown RBP27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 PRR12Q9ULL5 1215 aa27.49■■□□□ 1.99
R3HDM2-208ENST00000448732 KIAA0355O15063 1070 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 ADCY6O43306 1168 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 HSPD1P10809 573 aaKnown RBP27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 SMC5Q8IY18 1101 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 TRERF1Q96PN7 1200 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 LNPKQ9C0E8 428 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 UPF3AQ9H1J1 476 aaKnown RBP27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 STARD7Q9NQZ5 370 aa27.48■■□□□ 1.99
R3HDM2-208ENST00000448732 MYADML2A6NDP7 307 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 PQBP1O60828 265 aaKnown RBP27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 ITGB8P26012 769 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 GJA9P57773 515 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 C9orf50Q5SZB4 431 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 DCAF4Q8WV16 495 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 TCP11L1Q9NUJ3 509 aa27.47■■□□□ 1.99
R3HDM2-208ENST00000448732 ZMYM6O95789 1325 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 SOWAHBA6NEL2 793 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 ALAS1P13196 640 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 SNAP25P60880 206 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 NMIQ13287 307 aaPredicted RBP27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 CCDC174Q6PII3 467 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 RASGRP2Q7LDG7 609 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 PCSK9Q8NBP7 692 aaKnown RBP27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 RWDD1Q9H446 243 aaPredicted RBP27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 SPC25Q9HBM1 224 aa27.46■■□□□ 1.99
R3HDM2-208ENST00000448732 ELP1O95163 1332 aa27.45■■□□□ 1.99
R3HDM2-208ENST00000448732 ASB14A6NK59 587 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 TRIM6-TRIM34B2RNG4 842 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 C6orf222P0C671 652 aaPredicted RBP27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 NKX3-2P78367 333 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 IRX5P78411 483 aaPredicted RBP27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 FAAP100Q0VG06 881 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 BTNL9Q6UXG8 535 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 ZNF589Q86UQ0 364 aaPredicted RBP27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 TOMM22Q9NS69 142 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 TMEM39AQ9NV64 488 aa27.45■■□□□ 1.98
R3HDM2-208ENST00000448732 DCDC2CA8MYV0 355 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 ASGR1P07306 291 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 TOP1P11387 765 aaKnown RBP27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 RAG1P15918 1043 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 MUM1L1Q5H9M0 696 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 RRP12Q5JTH9 1297 aaKnown RBP27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 GLT1D1Q96MS3 346 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 TMEM47Q9BQJ4 181 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 MTMR7Q9Y216 660 aa27.44■■□□□ 1.98
R3HDM2-208ENST00000448732 CDK7P50613 346 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 CCDC96Q2M329 555 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 GNASQ5JWF2 1037 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 TTBK2Q6IQ55 1244 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 RILPL2Q969X0 211 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 RANBP17Q9H2T7 1088 aaKnown RBP27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 CYP39A1Q9NYL5 469 aa27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 LAMA2P24043 3122 aaKnown RBP27.43■■□□□ 1.98
R3HDM2-208ENST00000448732 CCDC171Q6TFL3 1326 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms