RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 ADAMTS4O75173 837 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 DUSP11O75319 330 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 PRDM1O75626 825 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 BMP3P12645 472 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 SLFN13Q68D06 897 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 NAPBQ9H115 298 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
PDLIM2-213ENST00000448520 A0A1W2PQ45 241 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 A0A1W2PQY0 241 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 RAG1P15918 1043 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 TFAP4Q01664 338 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 ACVR2BQ13705 512 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 ANKRD33Q7Z3H0 272 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 STARD7Q9NQZ5 370 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 LTBP2Q14767 1821 aa16.24■□□□□ 0.19
PDLIM2-213ENST00000448520 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 ACLYP53396 1101 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 PPARAQ07869 468 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 KCNA10Q16322 511 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 C9orf50Q5SZB4 431 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 PCSK9Q8NBP7 692 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 GUCD1Q96NT3 240 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 TMEM39AQ9NV64 488 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 ZHX1Q9UKY1 873 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
PDLIM2-213ENST00000448520 ELP1O95163 1332 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 PLA2G6O60733 806 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 PQBP1O60828 265 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 STAT2P52630 851 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 LRRC47Q8N1G4 583 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 GLT1D1Q96MS3 346 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 SEMA6BQ9H3T3 888 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
PDLIM2-213ENST00000448520 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 SYNRGQ9UMZ2 1314 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 MCM3APO60318 1980 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 SLC1A4P43007 532 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 FAAP100Q0VG06 881 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
PDLIM2-213ENST00000448520 HIP1O00291 1037 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 C6orf222P0C671 652 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 ITGB8P26012 769 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 GJA9P57773 515 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 FPGSQ05932 587 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 CCDC144BQ3MJ40 725 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 UPF3AQ9H1J1 476 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 ACAD9Q9H845 621 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 MYO9BQ13459 2157 aa16.2■□□□□ 0.18
PDLIM2-213ENST00000448520 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 ASB14A6NK59 587 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 TIMP1P01033 207 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 MCCP23508 829 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 CDK7P50613 346 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 NKX3-2P78367 333 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 GNASQ5JWF2 1037 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 FAM133AQ8N9E0 248 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 RNPC3Q96LT9 517 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 CDX2Q99626 313 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 HELLSQ9NRZ9 838 aa16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-213ENST00000448520 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 SGSM2O43147 1006 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 SEC24BO95487 1268 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 ASGR1P07306 291 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms