RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 A0A087X0B3 334 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 CLTAP09496 248 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 GKAP1Q5VSY0 366 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 ZNF572Q7Z3I7 529 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 TSGA10Q9BZW7 698 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 YIPF3Q9GZM5 350 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 RWDD2AQ9UIY3 292 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 MST1RQ04912 1400 aa10.46□□□□□ -0.73
SYNPO2-204ENST00000448416 RANBP6O60518 1105 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 CSB-PGBD3P0DP91 1061 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 CDC25CP30307 473 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 NLRP6P59044 892 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 NELFBQ8WX92 580 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 PIK3R5Q8WYR1 880 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 P3H4Q92791 437 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 MYL10Q9BUA6 226 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 VPS54Q9P1Q0 977 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 LRWD1Q9UFC0 647 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 PLAAQ9Y263 795 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 MYH10P35580 1976 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 TRAPPC3O43617 180 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 HEXIM1O94992 359 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 MMP1P03956 469 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 GLI1P08151 1106 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 PRLRP16471 622 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 SNX1Q13596 522 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 CCDC170Q8IYT3 715 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 ITFG2Q969R8 447 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 STRN4Q9NRL3 753 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 RBM12Q9NTZ6 932 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 MAPK8IP1Q9UQF2 711 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 L3MBTL1Q9Y468 752 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 CAPN6Q9Y6Q1 641 aa10.46□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 TMOD1P28289 359 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 THEMIS2Q5TEJ8 643 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 C1orf131Q8NDD1 294 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 WASF1Q92558 559 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 BLZF1Q9H2G9 400 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 DDX21Q9NR30 783 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 ZSCAN5CA6NGD5 496 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 MOCS3O95396 460 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 MYZAPP0CAP1 466 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 NR5A1Q13285 461 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 NTRK3Q16288 839 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 MIS18BP1Q6P0N0 1132 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 CCDC63Q8NA47 563 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 AGPAT5Q9NUQ2 364 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 DENND2AQ9ULE3 1009 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 PARP1P09874 1014 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 SLMAPQ14BN4 828 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 CCT6BQ92526 530 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 KDM4CQ9H3R0 1056 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 MLXIPQ9HAP2 919 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 TMBIM4Q9HC24 238 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 SENP2Q9HC62 589 aa10.45□□□□□ -0.74
SYNPO2-204ENST00000448416 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 FOXP2O15409 715 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 GHRP10912 638 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 MYL6BP14649 208 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CDC37Q16543 378 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 MEA1Q16626 185 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 ARMC9Q7Z3E5 817 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 MREGQ8N565 214 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CCDC42Q96M95 316 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 ALS2CR12Q96Q35 445 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CABP5Q9NP86 173 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 SLIT1O75093 1534 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CYB5R4Q7L1T6 521 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 KRT26Q7Z3Y9 468 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 GDF3Q9NR23 364 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 A0A1W2PQC6 194 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 LGALS16A8MUM7 142 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CAND2O75155 1236 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 SMNDC1O75940 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 RPS6KA3P51812 740 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 CCHCR1Q8TD31 782 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 FOXP1Q9H334 677 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 NOP53Q9NZM5 478 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 WHAMMQ8TF30 809 aa10.44□□□□□ -0.74
SYNPO2-204ENST00000448416 PHF20L1A8MW92 1017 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms