RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
CTSS-202ENST00000448301 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
CTSS-202ENST00000448301 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 ADD1P35611 737 aaKnown RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 STK3Q13188 491 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 ME3Q16798 604 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
CTSS-202ENST00000448301 ZNF536O15090 1300 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
CTSS-202ENST00000448301 PEX10O60683 326 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 LARGE1O95461 756 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 CCNA1P78396 465 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 SP3Q02447 781 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 FUT2Q10981 343 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 SCRN1Q12765 414 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 Q3C1V9 767 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 VAT1LQ9HCJ6 419 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 ZBTB5O15062 677 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 FOXN1O15353 648 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 CD2BP2O95400 341 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 ICAM1P05362 532 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 COPB2P35606 906 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 STAT3P40763 770 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 SNAP25P60880 206 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 NTRK3Q16288 839 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
CTSS-202ENST00000448301 MOV10L1Q9BXT6 1211 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
CTSS-202ENST00000448301 FKTNO75072 461 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 SLC25A27O95847 323 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.19
CTSS-202ENST00000448301 IFNAR1P17181 557 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 LACTBP83111 547 aaPredicted RBP16.27■□□□□ 0.19
CTSS-202ENST00000448301 PLS1Q14651 629 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.19
CTSS-202ENST00000448301 HOMER1Q86YM7 354 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.19
CTSS-202ENST00000448301 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.19
CTSS-202ENST00000448301 PIGSQ96S52 555 aa16.27■□□□□ 0.19
CTSS-202ENST00000448301 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
CTSS-202ENST00000448301 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 CPLX1O14810 134 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 ABCB7O75027 752 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
CTSS-202ENST00000448301 TKFCQ3LXA3 575 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 PORCNQ9H237 461 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 MROH8Q9H579 483 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
CTSS-202ENST00000448301 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
CTSS-202ENST00000448301 CCPG1Q9ULG6 757 aa16.26■□□□□ 0.19
CTSS-202ENST00000448301 CASP8AP2Q9UKL3 1982 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 CDKL5O76039 1030 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 MAPK4P31152 587 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 TRAF1Q13077 416 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 KIF22Q14807 665 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 FBXO11Q86XK2 927 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 RNF26Q9BY78 433 aaPredicted RBP16.25■□□□□ 0.19
CTSS-202ENST00000448301 RIPK3Q9Y572 518 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
CTSS-202ENST00000448301 PRPF3O43395 683 aaKnown RBP16.24■□□□□ 0.19
CTSS-202ENST00000448301 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
CTSS-202ENST00000448301 ERCC3P19447 782 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTSS-202ENST00000448301 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
CTSS-202ENST00000448301 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 SNX21Q969T3 373 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 PLXNA1Q9UIW2 1896 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 ABCB11O95342 1321 aa16.24■□□□□ 0.19
CTSS-202ENST00000448301 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
CTSS-202ENST00000448301 ALAS1P13196 640 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 CTGFP29279 349 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 FCGRTP55899 365 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 GPR142Q7Z601 462 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms