RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 GPR142Q7Z601 462 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 REPS2Q8NFH8 660 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 RAVER2Q9HCJ3 691 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 MAD2L2Q9UI95 211 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 RLFQ13129 1914 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 PALM3A6NDB9 673 aaPredicted RBP15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 STRNO43815 780 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 CTGFP29279 349 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC4A3P48751 1232 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 GNAQP50148 359 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 RAET1EQ8TD07 263 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 LZTS2Q9BRK4 669 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 PTPN22Q9Y2R2 807 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
ERGIC3-209ENST00000447986 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 ADGRF4Q8IZF3 695 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 STAG2Q8N3U4 1231 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 BRF1Q92994 677 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
ERGIC3-209ENST00000447986 KLF18A0A0U1RQI7 1052 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 ZBTB43O43298 467 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 ICAM1P05362 532 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 FCER1AP12319 257 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 FLT3LGP49771 235 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 RCAN1P53805 252 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 PRKCZQ05513 592 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 KCTD2Q14681 263 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 TKFCQ3LXA3 575 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 CHST13Q8NET6 341 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 C22orf23Q9BZE7 217 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 MCOLN1Q9GZU1 580 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 PDRG1Q9NUG6 133 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 CCPG1Q9ULG6 757 aa15.21■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC15A5A6NIM6 579 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 PTPREP23469 700 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 NUBP1P53384 320 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 CAP1Q01518 475 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 TRAF1Q13077 416 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 PPP2R5BQ15173 497 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 FANCBQ8NB91 859 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 IL17RAQ96F46 866 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 AGXT2Q9BYV1 514 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 VAT1LQ9HCJ6 419 aa15.21■□□□□ 0.02
ERGIC3-209ENST00000447986 CCDC196A0A1B0GTZ2 297 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 ALAS1P13196 640 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 RXRAP19793 462 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 SMARCA1P28370 1054 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 RGS2P41220 211 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 SNAP25P60880 206 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 IRF5Q13568 498 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 CDC37Q16543 378 aaPredicted RBP15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 TNS4Q8IZW8 715 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 AGBL1Q96MI9 1066 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 MMP19Q99542 508 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 GABRQQ9UN88 632 aa15.2■□□□□ 0.02
ERGIC3-209ENST00000447986 ZNF536O15090 1300 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 GOLGA8BA8MQT2 603 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 MAP2K5Q13163 448 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 GRB14Q14449 540 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 DPP9Q86TI2 863 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 ACAD9Q9H845 621 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 JMJD4Q9H9V9 463 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 HOMER2Q9NSB8 354 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 GJD2Q9UKL4 321 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 PTCH2Q9Y6C5 1203 aa15.19■□□□□ 0.02
ERGIC3-209ENST00000447986 MGAMO43451 1857 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 ZBTB5O15062 677 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 ADORA2AP29274 412 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 RBM25P49756 843 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 METAP2P50579 478 aaKnown RBP eCLIP15.18■□□□□ 0.023e-8■■□□□ 14.5
ERGIC3-209ENST00000447986 RTN1Q16799 776 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 SLC9C1Q4G0N8 1177 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 MORN1Q5T089 497 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms