RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 PARD6BQ9BYG5 372 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 IFIH1Q9BYX4 1025 aaKnown RBP15.52■□□□□ 0.08
OTUD4-201ENST00000447906 THRAP3Q9Y2W1 955 aaKnown RBP15.52■□□□□ 0.08
OTUD4-201ENST00000447906 ABCC12Q96J65 1359 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 MCM3P25205 808 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 PRCPP42785 496 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 FNBP4Q8N3X1 1017 aaPredicted RBP15.52■□□□□ 0.08
OTUD4-201ENST00000447906 RGS22Q8NE09 1264 aa15.52■□□□□ 0.08
OTUD4-201ENST00000447906 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.52■□□□□ 0.08
OTUD4-201ENST00000447906 PTPAQ15257 358 aa15.52■□□□□ 0.07
OTUD4-201ENST00000447906 UBE2SQ16763 222 aa15.52■□□□□ 0.07
OTUD4-201ENST00000447906 RBM43Q6ZSC3 357 aaKnown RBP15.52■□□□□ 0.07
OTUD4-201ENST00000447906 CLEC10AQ8IUN9 316 aa15.52■□□□□ 0.07
OTUD4-201ENST00000447906 SECISBP2LQ93073 1101 aaKnown RBP15.52■□□□□ 0.07
OTUD4-201ENST00000447906 CNOT6LQ96LI5 555 aaKnown RBP15.52■□□□□ 0.07
OTUD4-201ENST00000447906 BRIP1Q9BX63 1249 aa15.52■□□□□ 0.07
OTUD4-201ENST00000447906 SAR1BQ9Y6B6 198 aa15.52■□□□□ 0.07
OTUD4-201ENST00000447906 DDX39AO00148 427 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 ZEB2O60315 1214 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 CFBP00751 764 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 CXCR5P32302 372 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 CCDC65Q8IXS2 484 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 IPO4Q8TEX9 1081 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 TMEM47Q9BQJ4 181 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 WDR19Q8NEZ3 1342 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 ATP2C2O75185 946 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 TOB1P50616 345 aaPredicted RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 TRIM14Q14142 442 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 NSUN4Q96CB9 384 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 NAA15Q9BXJ9 866 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 MYO6Q9UM54 1294 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 DNM2P50570 870 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 UTP14CQ5TAP6 766 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 PSTPIP2Q9H939 334 aa15.51■□□□□ 0.07
OTUD4-201ENST00000447906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
OTUD4-201ENST00000447906 CDK8P49336 464 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 CDR1P51861 262 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 SNAP25P60880 206 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 PRR16Q569H4 304 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 CDC23Q9UJX2 597 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 PCDHB13Q9Y5F0 798 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 KIAA0754O94854 1291 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 SERPINB2P05120 415 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 IFFO1Q0D2I5 559 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 NTRK3Q16288 839 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 ZNF658Q5TYW1 1059 aaPredicted RBP15.5■□□□□ 0.07
OTUD4-201ENST00000447906 CLEC4GQ6UXB4 293 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 SMCR8Q8TEV9 937 aaPredicted RBP15.5■□□□□ 0.07
OTUD4-201ENST00000447906 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 TUBE1Q9UJT0 475 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 ERLIN2O94905 339 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 GABPB1Q06547 395 aaPredicted RBP15.5■□□□□ 0.07
OTUD4-201ENST00000447906 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
OTUD4-201ENST00000447906 FAM13AO94988 1023 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 HMGB2P26583 209 aaKnown RBP15.49■□□□□ 0.07
OTUD4-201ENST00000447906 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 BPIFA3Q9BQP9 254 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 XDHP47989 1333 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 TMEM110-MUSTN1A8MSY1 372 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 NTSR2O95665 410 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 NFIXQ14938 502 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 KANSL2Q9H9L4 492 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 DISC1Q9NRI5 854 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 TRAPPC10P48553 1259 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 SETQ01105 290 aaPredicted RBP15.49■□□□□ 0.07
OTUD4-201ENST00000447906 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
OTUD4-201ENST00000447906 CPXCR1Q8N123 301 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 KIAA1024Q9UPX6 916 aa15.49■□□□□ 0.07
OTUD4-201ENST00000447906 XRN1Q8IZH2 1706 aaKnown RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 NFAT5O94916 1531 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 POTEMA6NI47 508 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 PNMA6AP0CW24 399 aaPredicted RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 LONRF2Q1L5Z9 754 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 SND1Q7KZF4 910 aaKnown RBP eCLIP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 PCDHA1Q9Y5I3 950 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 MEIS1O00470 390 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 CETN3O15182 167 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 MFAP3LO75121 409 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
OTUD4-201ENST00000447906 UBXN2AP68543 259 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 TCP11X2Q5H9J9 407 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 SRGAP1Q7Z6B7 1085 aa15.48■□□□□ 0.07
OTUD4-201ENST00000447906 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms