RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
COL11A1-205ENST00000447608 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 CYP26B1Q9NR63 512 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 AASDHPPTQ9NRN7 309 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 GFOD1Q9NXC2 390 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 TRHDEQ9UKU6 1024 aa8.39□□□□□ -1.07
COL11A1-205ENST00000447608 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 LRRN2O75325 713 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 APBA3O96018 575 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 SCG5P05408 212 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 BPIP17213 487 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 ATF3P18847 181 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 RAC1P63000 192 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 GRB10Q13322 594 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-205ENST00000447608 DENND5AQ6IQ26 1287 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 ZCCHC8Q6NZY4 707 aaKnown RBP8.38□□□□□ -1.07
COL11A1-205ENST00000447608 KCNT2Q6UVM3 1135 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 OR2W6PQ8NHA6 318 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 WNK4Q96J92 1243 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-205ENST00000447608 LGR6Q9HBX8 967 aa8.38□□□□□ -1.07
COL11A1-205ENST00000447608 LCE2BO14633 110 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 CPP00450 1065 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 PYGMP11217 842 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 KCNA6P17658 529 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 RAB6AP20340 208 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 ETV3P41162 512 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 DGKGP49619 791 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 SCNN1BP51168 640 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 AMPD2Q01433 879 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 PIN1Q13526 163 aaPredicted RBP8.37□□□□□ -1.07
COL11A1-205ENST00000447608 DPY19L1Q2PZI1 675 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 STYK1Q6J9G0 422 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 ABHD17CQ6PCB6 329 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.37□□□□□ -1.07
COL11A1-205ENST00000447608 CHMP4CQ96CF2 233 aa8.37□□□□□ -1.07
COL11A1-205ENST00000447608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL11A1-205ENST00000447608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 B4E1Z4 1266 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 M0R2C6 588 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 AQP7O14520 342 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 GABRDO14764 452 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 ZEB2O60315 1214 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 HOXB4P17483 251 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 GUCY1A3Q02108 690 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 BIRC2Q13490 618 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 ZBTB46Q86UZ6 589 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 PASD1Q8IV76 773 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 AGGF1Q8N302 714 aaeCLIP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 KREMEN2Q8NCW0 462 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 DSCC1Q9BVC3 393 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 RTFDC1Q9BY42 306 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 CDH19Q9H159 772 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 ACSS3Q9H6R3 686 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 CRTAC1Q9NQ79 661 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 SAMD15Q9P1V8 674 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 NOB1Q9ULX3 412 aaKnown RBP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 SF3B6Q9Y3B4 125 aaKnown RBP8.36□□□□□ -1.07
COL11A1-205ENST00000447608 DAGLAQ9Y4D2 1042 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 PCDHA8Q9Y5H6 950 aa8.36□□□□□ -1.07
COL11A1-205ENST00000447608 TNKSO95271 1327 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 ZNF891A8MT65 544 aaPredicted RBP8.35□□□□□ -1.07
COL11A1-205ENST00000447608 CAND2O75155 1236 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 SCRN1Q12765 414 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 SYDE2Q5VT97 1194 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 ANKRD34AQ69YU3 496 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 IGF2-ASQ6U949 168 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 TMC3Q7Z5M5 1100 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 NXPE1Q8N323 547 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 TTC8Q8TAM2 541 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 RPS6KC1Q96S38 1066 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
COL11A1-205ENST00000447608 MINPP1Q9UNW1 487 aa8.35□□□□□ -1.07
COL11A1-205ENST00000447608 MEIS1O00470 390 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 KRT18P05783 430 aaKnown RBP8.34□□□□□ -1.07
COL11A1-205ENST00000447608 ITIH2P19823 946 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 ANKLE2Q86XL3 938 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-205ENST00000447608 TRIM11Q96F44 468 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 PSMG3-AS1Q96PY0 264 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 ORAI3Q9BRQ5 295 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 MCMBPQ9BTE3 642 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 RRAGCQ9HB90 399 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
COL11A1-205ENST00000447608 APOBEC2Q9Y235 224 aaKnown RBP8.34□□□□□ -1.07
COL11A1-205ENST00000447608 E2F8A0AVK6 867 aa8.33□□□□□ -1.08
COL11A1-205ENST00000447608 H0Y8X5 98 aa8.33□□□□□ -1.08
COL11A1-205ENST00000447608 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
COL11A1-205ENST00000447608 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
COL11A1-205ENST00000447608 CELA2BP08218 269 aaPredicted RBP8.33□□□□□ -1.08
COL11A1-205ENST00000447608 SLURP2P0DP57 97 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms