RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
DDX56-206ENST00000446987 RASAL3Q86YV0 1011 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 AIDAQ96BJ3 306 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 SGSM3Q96HU1 749 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 PTPRFP10586 1907 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 MYH8P13535 1937 aa14.79□□□□□ -0.04
DDX56-206ENST00000446987 GSG1L2A8MUP6 293 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 SLC10A3P09131 477 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 INPP5BP32019 993 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 PPP2R3AQ06190 1150 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 DEFB115Q30KQ5 88 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 BEND6Q5SZJ8 279 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 ARMCX5Q6P1M9 558 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 ZIC5Q96T25 663 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 LAMA4Q16363 1823 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 VPS37CA5D8V6 355 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 PPP1R12BO60237 982 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 NR1I2O75469 434 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 CYP2D6P10635 497 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 GJA5P36382 358 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 PLCD1P51178 756 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 VGLL4Q14135 290 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 TTLL12Q14166 644 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 NEDD9Q14511 834 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 RGMBQ6NW40 437 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 C11orf57Q6ZUT1 292 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
DDX56-206ENST00000446987 SNCAIPQ9Y6H5 919 aa14.78□□□□□ -0.04
DDX56-206ENST00000446987 TBC1D12O60347 775 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 SSR1P43307 286 aaKnown RBP14.77□□□□□ -0.05
DDX56-206ENST00000446987 HSP90B2PQ58FF3 399 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 LARP1BQ659C4 914 aaKnown RBP14.77□□□□□ -0.05
DDX56-206ENST00000446987 FOXR1Q6PIV2 292 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 GIMAP7Q8NHV1 300 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 RNF217Q8TC41 542 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 MIEF2Q96C03 454 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 CAPNS2Q96L46 248 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 WRNIP1Q96S55 665 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 DHX36Q9H2U1 1008 aaKnown RBP14.77□□□□□ -0.05
DDX56-206ENST00000446987 VIPAS39Q9H9C1 493 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 L1RE1Q9UN81 338 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.05
DDX56-206ENST00000446987 GREB1LQ9C091 1923 aaPredicted RBP14.77□□□□□ -0.05
DDX56-206ENST00000446987 CYP2D7A0A087X1C5 515 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 GABPAQ06546 454 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 ZKSCAN8Q15776 578 aaPredicted RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 SHROOM1Q2M3G4 852 aaPredicted RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 DCAF15Q66K64 600 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 GBP6Q6ZN66 633 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 ZKSCAN4Q969J2 545 aaPredicted RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 PDE11AQ9HCR9 933 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 HELLSQ9NRZ9 838 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 AOC2O75106 756 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 JAG1P78504 1218 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 BICD2Q8TD16 824 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 LSG1Q9H089 658 aaKnown RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 EHD4Q9H223 541 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 ALDH8A1Q9H2A2 487 aaPredicted RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.76□□□□□ -0.05
DDX56-206ENST00000446987 PI4KBQ9UBF8 816 aa14.76□□□□□ -0.05
DDX56-206ENST00000446987 ANKRD33BA6NCL7 494 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 NOL9Q5SY16 702 aaKnown RBP14.75□□□□□ -0.05
DDX56-206ENST00000446987 ANKRD13AQ8IZ07 590 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
DDX56-206ENST00000446987 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
DDX56-206ENST00000446987 HOOK2Q96ED9 719 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 MCM9Q9NXL9 1143 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 CFAP45Q9UL16 551 aa14.75□□□□□ -0.05
DDX56-206ENST00000446987 UNCXA6NJT0 531 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 SHOX2O60902 331 aaPredicted RBP14.74□□□□□ -0.05
DDX56-206ENST00000446987 AARSP49588 968 aaKnown RBP eCLIP14.74□□□□□ -0.05
DDX56-206ENST00000446987 ZNF157P51786 506 aaPredicted RBP14.74□□□□□ -0.05
DDX56-206ENST00000446987 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 KAT2BQ92831 832 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 PGBD1Q96JS3 809 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 ELP3Q9H9T3 547 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 HERC5Q9UII4 1024 aaKnown RBP14.74□□□□□ -0.05
DDX56-206ENST00000446987 FAN1Q9Y2M0 1017 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 ROBO3Q96MS0 1386 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 USP17L12C9JPN9 530 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 USP17L21D6R901 530 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 ELF1P32519 619 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 SHMT1P34896 483 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 CRYMQ14894 314 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 MCMDC2Q4G0Z9 681 aa14.74□□□□□ -0.05
DDX56-206ENST00000446987 C12orf60Q5U649 245 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms