RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PLIN2Q99541 437 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 HDAC9Q9UKV0 1011 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 SCN9AQ15858 1988 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 C10orf71Q711Q0 1435 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PNMA6FA0A0J9YX94 578 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 IKBKBO14920 756 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 ENTPD3O75355 529 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 ATP1A3P13637 1013 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 CDC25BP30305 580 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 ADCY7P51828 1080 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 KARSQ15046 597 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PPP4R3BQ5MIZ7 849 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 TATDN1Q6P1N9 297 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 XPO4Q9C0E2 1151 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 BLZF1Q9H2G9 400 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PDCL3Q9H2J4 239 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 VEZTQ9HBM0 779 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 FANCLQ9NW38 375 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PIM2Q9P1W9 311 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 PYCARDQ9ULZ3 195 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 SERPINC1P01008 464 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 GH2P01242 217 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 VIL1P09327 827 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 MORC3Q14149 939 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 NOLC1Q14978 699 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 NT5DC1Q5TFE4 455 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 NEK8Q86SG6 692 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 NIM1KQ8IY84 436 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 MLKLQ8NB16 471 aa10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL6A4P1-201ENST00000446690 FOCADQ5VW36 1801 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 UBA7P41226 1012 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 FANCCQ00597 558 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 ARID5BQ14865 1188 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 UBE2SQ16763 222 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 TMEM179Q6ZVK1 233 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 SIAH1Q8IUQ4 282 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 FAM177A1Q8N128 213 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 FBXO41Q8TF61 875 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 F5H6K3 240 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 ZBTB5O15062 677 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 NEMFO60524 1076 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 OFD1O75665 1012 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 STAT6P42226 847 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 TECP42680 631 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 SNAP25P60880 206 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 JAG1P78504 1218 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 KLRC3Q07444 240 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 KLHL10Q6JEL2 608 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 ZNF70Q9UC06 446 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 ZNRF3Q9ULT6 936 aa10.79□□□□□ -0.68
COL6A4P1-201ENST00000446690 hCG_1984214I3L0E3 225 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 OR52Z1P0C646 297 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 CDK11BP21127 795 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 TNNI2P48788 182 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 DPYDQ12882 1025 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 RRP1BQ14684 758 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 E2F4Q16254 413 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 SMYD4Q8IYR2 804 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 ZNF713Q8N859 430 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 CACTINQ8WUQ7 758 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 MKL1Q969V6 931 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 PYM1Q9BRP8 204 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 LAD1O00515 517 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 POLD1P28340 1107 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 TXKP42681 527 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 UBASH3AP57075 661 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 CUL4BQ13620 913 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 DALRD3Q5D0E6 543 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 MIGA2Q7L4E1 593 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 TMC6Q7Z403 805 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 SPATA20Q8TB22 786 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 KIAA1524Q8TCG1 905 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 PSTPIP2Q9H939 334 aa10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 SCAF8Q9UPN6 1271 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-201ENST00000446690 MRPL12P52815 198 aaKnown RBP10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 STX17P56962 302 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 POTEDQ86YR6 584 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms