RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 MYH2Q9UKX2 1941 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 USP17L3A6NCW0 530 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 USP17L4A6NCW7 530 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 H7C1D1 291 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 CT47A1Q5JQC4 288 aaPredicted RBP15.93■□□□□ 0.14
ERCC3-203ENST00000445889 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
ERCC3-203ENST00000445889 DTHD1Q6ZMT9 781 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 USP17L1Q7RTZ2 530 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 HEATR3Q7Z4Q2 680 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 ANAPC4Q9UJX5 808 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 CHD4Q14839 1912 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 LGALS16A8MUM7 142 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 BMP15O95972 392 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MECOMQ03112 1051 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 STK4Q13043 487 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 PFKFB3Q16875 520 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 ANKRD40Q6AI12 368 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 FAM84BQ96KN1 310 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MLXIPQ9HAP2 919 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MCM9Q9NXL9 1143 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 LRWD1Q9UFC0 647 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MYH6P13533 1939 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 EIF3CLB5ME19 914 aaKnown RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 SLC44A5Q8NCS7 719 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 ZNF507Q8TCN5 953 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 CELF1Q92879 486 aaKnown RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 EIF3CQ99613 913 aaKnown RBP15.92■□□□□ 0.14
ERCC3-203ENST00000445889 HAUS4Q9H6D7 363 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 MYO1AQ9UBC5 1043 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 HPCAL4Q9UM19 191 aa15.92■□□□□ 0.14
ERCC3-203ENST00000445889 CCDC194A0A1B0GVG4 234 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 MTIF2P46199 727 aaKnown RBP15.91■□□□□ 0.14
ERCC3-203ENST00000445889 TFAP4Q01664 338 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 COG1Q8WTW3 980 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 FAM207AQ9NSI2 230 aaPredicted RBP15.91■□□□□ 0.14
ERCC3-203ENST00000445889 COL1A1P02452 1464 aaPredicted RBP15.91■□□□□ 0.14
ERCC3-203ENST00000445889 EXOC5O00471 708 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 ZNF263O14978 683 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 KLRC4O43908 158 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 STIM1Q13586 685 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 CCDC96Q2M329 555 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 WDR93Q6P2C0 686 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 AFAP1L1Q8TED9 768 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 CAPN11Q9UMQ6 739 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 PSMD14O00487 310 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 EPHB6O15197 1021 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 SLC35G1Q2M3R5 365 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 CAVIN4Q5BKX8 364 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 RCSD1Q6JBY9 416 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 DUSP9Q99956 384 aaKnown RBP15.91■□□□□ 0.14
ERCC3-203ENST00000445889 RMND1Q9NWS8 449 aa15.91■□□□□ 0.14
ERCC3-203ENST00000445889 COL4A1P02462 1669 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 RCAN1P53805 252 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 TUBB4BP68371 445 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 PDE4DQ08499 809 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 DNAJC7Q99615 494 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 SELENOOQ9BVL4 669 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 SLC39A2Q9NP94 309 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 MED4Q9NPJ6 270 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 DMGDHQ9UI17 866 aaKnown RBP15.9■□□□□ 0.14
ERCC3-203ENST00000445889 STX8Q9UNK0 236 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 PSMA7O14818 248 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 NCK2O43639 380 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 KRT86O43790 486 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 NTSR2O95665 410 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 PLCG1P19174 1290 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 LETM2Q2VYF4 491 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 ANKRD18AQ8IVF6 992 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 CCDC155Q8N6L0 562 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
ERCC3-203ENST00000445889 NOC4LQ9BVI4 516 aaKnown RBP15.9■□□□□ 0.14
ERCC3-203ENST00000445889 IL17RBQ9NRM6 502 aa15.9■□□□□ 0.14
ERCC3-203ENST00000445889 AGPSO00116 658 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 MOCS3O95396 460 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CALM1P0DP23 149 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CALM2P0DP24 149 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CALM3P0DP25 149 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 ASIC1P78348 528 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 ITPK1Q13572 414 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 TRIM14Q14142 442 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 NSUN4Q96CB9 384 aaKnown RBP15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CNOT6LQ96LI5 555 aaKnown RBP15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CRACR2AQ9BSW2 395 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 LRRC1Q9BTT6 524 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 KAT14Q9H8E8 782 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 EXOC1Q9NV70 894 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms