RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 NEDD4P46934 1319 aa21.42■■□□□ 1.02
VCX3B-203ENST00000444481 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
VCX3B-203ENST00000444481 AGBL1Q96MI9 1066 aa21.42■■□□□ 1.02
VCX3B-203ENST00000444481 SENP6Q9GZR1 1112 aaPredicted RBP21.42■■□□□ 1.02
VCX3B-203ENST00000444481 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 ZNF865P0CJ78 1059 aaPredicted RBP21.41■■□□□ 1.02
VCX3B-203ENST00000444481 RARBP10826 455 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 PDHBP11177 359 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 AKR1A1P14550 325 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 TRERF1Q96PN7 1200 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 KRT23Q9C075 422 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 RANBP17Q9H2T7 1088 aaKnown RBP21.41■■□□□ 1.02
VCX3B-203ENST00000444481 PRO3102Q9H379 93 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 CNNM2Q9H8M5 875 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 HOMER2Q9NSB8 354 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 RNF146Q9NTX7 359 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 PNMA2Q9UL42 364 aa21.41■■□□□ 1.02
VCX3B-203ENST00000444481 KDM4AO75164 1064 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 ICAM1P05362 532 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 SNHG28P0DPA3 235 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 GJC2Q5T442 439 aaPredicted RBP21.4■■□□□ 1.02
VCX3B-203ENST00000444481 SYDE2Q5VT97 1194 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 ANO1Q5XXA6 986 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 CCDC174Q6PII3 467 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 RASGRP2Q7LDG7 609 aa21.4■■□□□ 1.02
VCX3B-203ENST00000444481 A0A1W2PPC1 479 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 SNAI1O95863 264 aaPredicted RBP21.39■■□□□ 1.01
VCX3B-203ENST00000444481 ALAS1P13196 640 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 CHMLP26374 656 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 ZNF543Q08ER8 600 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 LRRC26Q2I0M4 334 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 TTBK2Q6IQ55 1244 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 ANKS1AQ92625 1134 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 ABHD16BQ9H3Z7 469 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 A1CFQ9NQ94 594 aaKnown RBP21.39■■□□□ 1.01
VCX3B-203ENST00000444481 XPNPEP3Q9NQH7 507 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 RBM27Q9P2N5 1060 aaKnown RBP21.39■■□□□ 1.01
VCX3B-203ENST00000444481 FAM184BQ9ULE4 1060 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 CCPG1Q9ULG6 757 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.01
VCX3B-203ENST00000444481 POTEB2H3BUK9 544 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 TAL1P17542 331 aaPredicted RBP21.38■■□□□ 1.01
VCX3B-203ENST00000444481 LRRC41Q15345 812 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 GPATCH4Q5T3I0 446 aaKnown RBP21.38■■□□□ 1.01
VCX3B-203ENST00000444481 RNF180Q86T96 592 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 FAM133AQ8N9E0 248 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
VCX3B-203ENST00000444481 ZKSCAN3Q9BRR0 538 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 IL25Q9H293 177 aa21.38■■□□□ 1.01
VCX3B-203ENST00000444481 FRMPD2Q68DX3 1309 aaPredicted RBP21.37■■□□□ 1.01
VCX3B-203ENST00000444481 B4E1Z4 1266 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 SLC16A2P36021 539 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 ACVR2BQ13705 512 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 FGD4Q96M96 766 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 GPCPD1Q9NPB8 672 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.37■■□□□ 1.01
VCX3B-203ENST00000444481 ZSWIM5Q9P217 1185 aa21.37■■□□□ 1.01
VCX3B-203ENST00000444481 ZMYND8Q9ULU4 1186 aaPredicted RBP21.37■■□□□ 1.01
VCX3B-203ENST00000444481 TRIOBPQ9H2D6 2365 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 ASB14A6NK59 587 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 BMP8BP34820 402 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 FXR1P51114 621 aaKnown RBP eCLIP21.36■■□□□ 1.01
VCX3B-203ENST00000444481 SNAP25P60880 206 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 ARMCX2Q7L311 632 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 GDF15Q99988 308 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 KAT14Q9H8E8 782 aa21.36■■□□□ 1.01
VCX3B-203ENST00000444481 RANBP2P49792 3224 aaKnown RBP21.35■■□□□ 1.01
VCX3B-203ENST00000444481 MYCNP04198 464 aaPredicted RBP21.35■■□□□ 1.01
VCX3B-203ENST00000444481 SLC39A5Q6ZMH5 540 aa21.35■■□□□ 1.01
VCX3B-203ENST00000444481 UBAC1Q9BSL1 405 aa21.35■■□□□ 1.01
VCX3B-203ENST00000444481 ZHX1Q9UKY1 873 aaPredicted RBP21.35■■□□□ 1.01
VCX3B-203ENST00000444481 PHF24Q9UPV7 400 aa21.35■■□□□ 1.01
VCX3B-203ENST00000444481 U3KPZ7 1027 aaPredicted RBP21.35■■□□□ 1.01
VCX3B-203ENST00000444481 SGSM2O43147 1006 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 DUSP11O75319 330 aaKnown RBP21.34■■□□□ 1.01
VCX3B-203ENST00000444481 ADCYAP1R1P41586 468 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 ATN1P54259 1190 aaPredicted RBP21.34■■□□□ 1.01
VCX3B-203ENST00000444481 CNTN2Q02246 1040 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 TRDNQ13061 729 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 MUM1L1Q5H9M0 696 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 C1orf53Q5VUE5 145 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 ENAHQ8N8S7 591 aaPredicted RBP21.34■■□□□ 1.01
VCX3B-203ENST00000444481 TSEN34Q9BSV6 310 aaKnown RBP21.34■■□□□ 1.01
VCX3B-203ENST00000444481 CYP39A1Q9NYL5 469 aa21.34■■□□□ 1.01
VCX3B-203ENST00000444481 TNKSO95271 1327 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 WDR19Q8NEZ3 1342 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 DNAH12Q6ZR08 3092 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 SOWAHBA6NEL2 793 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 ADAMTS4O75173 837 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 PGK1P00558 417 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 SYN1P17600 705 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 SNX17Q15036 470 aa21.33■■□□□ 1.01
VCX3B-203ENST00000444481 LOC102724159A0A0B4J2E5 919 aa21.32■■□□□ 1
VCX3B-203ENST00000444481 RTP1P59025 263 aa21.32■■□□□ 1
VCX3B-203ENST00000444481 PWP2Q15269 919 aaKnown RBP21.32■■□□□ 1
VCX3B-203ENST00000444481 CCDC144BQ3MJ40 725 aa21.32■■□□□ 1
VCX3B-203ENST00000444481 ASPRV1Q53RT3 343 aa21.32■■□□□ 1
VCX3B-203ENST00000444481 NSMFQ6X4W1 530 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms