RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 RNF186Q9NXI6 227 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 CXCL11O14625 94 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 LILRA1O75019 489 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
LINC00475-208ENST00000444476 ASNSP08243 561 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 CAP2P40123 477 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
LINC00475-208ENST00000444476 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
LINC00475-208ENST00000444476 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
LINC00475-208ENST00000444476 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
LINC00475-208ENST00000444476 ESPNB1AK53 854 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 TRPA1O75762 1119 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 NEFLP07196 543 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 PTPRAP18433 802 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 PUS7LQ9H0K6 701 aaKnown RBP13.21□□□□□ -0.29
LINC00475-208ENST00000444476 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
LINC00475-208ENST00000444476 SAP30BPQ9UHR5 308 aaKnown RBP13.21□□□□□ -0.29
LINC00475-208ENST00000444476 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
LINC00475-208ENST00000444476 LBX1P52954 281 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 CCL15Q16663 113 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
LINC00475-208ENST00000444476 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
LINC00475-208ENST00000444476 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 SLC4A4Q9Y6R1 1079 aa13.2□□□□□ -0.3
LINC00475-208ENST00000444476 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 HIP1O00291 1037 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 GPAA1O43292 621 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
LINC00475-208ENST00000444476 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 BRI3BPQ8WY22 251 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 DNAJC18Q9H819 358 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
LINC00475-208ENST00000444476 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
LINC00475-208ENST00000444476 FAM196BA6NMK8 535 aa13.18□□□□□ -0.3
LINC00475-208ENST00000444476 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00475-208ENST00000444476 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
LINC00475-208ENST00000444476 GABPAQ06546 454 aa13.18□□□□□ -0.3
LINC00475-208ENST00000444476 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
LINC00475-208ENST00000444476 LYPD4Q6UWN0 246 aa13.18□□□□□ -0.3
LINC00475-208ENST00000444476 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
LINC00475-208ENST00000444476 A0A0G2JLL6 359 aaPredicted RBP13.17□□□□□ -0.3
LINC00475-208ENST00000444476 PRKAB2O43741 272 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 PLCD1P51178 756 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
LINC00475-208ENST00000444476 SLFNL1Q499Z3 407 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
LINC00475-208ENST00000444476 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 PRRT2Q7Z6L0 340 aaPredicted RBP13.17□□□□□ -0.3
LINC00475-208ENST00000444476 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 PTPN18Q99952 460 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
LINC00475-208ENST00000444476 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
LINC00475-208ENST00000444476 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 PTPRFP10586 1907 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
LINC00475-208ENST00000444476 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 USP17L21D6R901 530 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
LINC00475-208ENST00000444476 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
LINC00475-208ENST00000444476 MYH8P13535 1937 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 M0R2C6 588 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 GPR25O00155 361 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 CHGBP05060 677 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 APPP05067 770 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 SLC3A2P08195 630 aaKnown RBP13.15□□□□□ -0.3
LINC00475-208ENST00000444476 CELA2BP08218 269 aaPredicted RBP13.15□□□□□ -0.3
LINC00475-208ENST00000444476 SHMT1P34896 483 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 GPC1P35052 558 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 TDO2P48775 406 aa13.15□□□□□ -0.3
LINC00475-208ENST00000444476 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00475-208ENST00000444476 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms