RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
SF3A1-203ENST00000444440 NR2E3Q9Y5X4 410 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 B4E1Z4 1266 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 MSCO60682 206 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 PDHBP11177 359 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
SF3A1-203ENST00000444440 OAZ1P54368 228 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SF3A1-203ENST00000444440 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
SF3A1-203ENST00000444440 CCDC96Q2M329 555 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
SF3A1-203ENST00000444440 SLC5A4Q9NY91 659 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 TAF6LQ9Y6J9 622 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 COL6A3P12111 3177 aa12.83□□□□□ -0.36
SF3A1-203ENST00000444440 DNM1LO00429 736 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 ZNF213O14771 459 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 KDM4AO75164 1064 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 MFAP1P55081 439 aaKnown RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 PTH1RQ03431 593 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 LRRC41Q15345 812 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 BTNL9Q6UXG8 535 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 CHST13Q8NET6 341 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 GDF15Q99988 308 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 CPVLQ9H3G5 476 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
SF3A1-203ENST00000444440 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
SF3A1-203ENST00000444440 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 HIP1O00291 1037 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 PGK1P00558 417 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 ALAS1P13196 640 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 PTGS1P23219 599 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 CHMLP26374 656 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
SF3A1-203ENST00000444440 MYADML2A6NDP7 307 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 FDX1P10109 184 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 RTP1P59025 263 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 CYB5R4Q7L1T6 521 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 RNF41Q9H4P4 317 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-203ENST00000444440 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 EYSQ5T1H1 3165 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
SF3A1-203ENST00000444440 GBF1Q92538 1859 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 NFIBO00712 420 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 AKR1A1P14550 325 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
SF3A1-203ENST00000444440 ESR2Q92731 530 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 TTC14Q96N46 770 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
SF3A1-203ENST00000444440 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 RAD50Q92878 1312 aa12.79□□□□□ -0.36
SF3A1-203ENST00000444440 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-203ENST00000444440 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 ICAM1P05362 532 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 CYP21A2P08686 494 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 RARBP10826 455 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 ACVR2BQ13705 512 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-203ENST00000444440 SNX17Q15036 470 aa12.78□□□□□ -0.36
SF3A1-203ENST00000444440 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms