RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 HOMER2Q9NSB8 354 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 COLQQ9Y215 455 aaPredicted RBP16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 B4E1Z4 1266 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 DNM1LO00429 736 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 HABP4Q5JVS0 413 aaKnown RBP16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 TTBK2Q6IQ55 1244 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 FGD4Q96M96 766 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 RANBP17Q9H2T7 1088 aaKnown RBP16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
AP001062.3-202ENST00000444409 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ICAM1P05362 532 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ZNF865P0CJ78 1059 aaPredicted RBP16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 TAL1P17542 331 aaPredicted RBP16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 SLC16A2P36021 539 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 SNAP25P60880 206 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 CCDC174Q6PII3 467 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 KRT23Q9C075 422 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
AP001062.3-202ENST00000444409 SGSM2O43147 1006 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 SLC34A2O95436 690 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 ALAS1P13196 640 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 PTH1RQ03431 593 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 C7orf61Q8IZ16 206 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 TRERF1Q96PN7 1200 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 ZSCAN10Q96SZ4 725 aaPredicted RBP16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 GPCPD1Q9NPB8 672 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 CCPG1Q9ULG6 757 aa16.05■□□□□ 0.16
AP001062.3-202ENST00000444409 TNKSO95271 1327 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 RARBP10826 455 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 AKR1A1P14550 325 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 LRRC26Q2I0M4 334 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 PNMA1Q8ND90 353 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 PRO3102Q9H379 93 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 TRIOBPQ9H2D6 2365 aa16.04■□□□□ 0.16
AP001062.3-202ENST00000444409 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 CYP21A2P08686 494 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 LRRC41Q15345 812 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 KAT14Q9H8E8 782 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
AP001062.3-202ENST00000444409 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 KBTBD13C9JR72 458 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 GOLGA8HP0CJ92 632 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 ARMCX2Q7L311 632 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 CYP39A1Q9NYL5 469 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 PNMA2Q9UL42 364 aa16.02■□□□□ 0.16
AP001062.3-202ENST00000444409 SOWAHBA6NEL2 793 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 CYB5R4Q7L1T6 521 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 LENG1Q96BZ8 264 aaPredicted RBP16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 FAM184BQ9ULE4 1060 aa16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 ZMYND8Q9ULU4 1186 aaPredicted RBP16.01■□□□□ 0.15
AP001062.3-202ENST00000444409 ASTN1O14525 1302 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 WDR19Q8NEZ3 1342 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 LAMA3Q16787 3333 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 PGK1P00558 417 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
AP001062.3-202ENST00000444409 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
AP001062.3-202ENST00000444409 TRDNQ13061 729 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 SEC23AQ15436 765 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 NSMFQ6X4W1 530 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 RNF180Q86T96 592 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 PHF24Q9UPV7 400 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 MCM3APO60318 1980 aa16■□□□□ 0.15
AP001062.3-202ENST00000444409 SYNRGQ9UMZ2 1314 aa15.99■□□□□ 0.15
AP001062.3-202ENST00000444409 ASB14A6NK59 587 aa15.99■□□□□ 0.15
AP001062.3-202ENST00000444409 NFIBO00712 420 aa15.99■□□□□ 0.15
AP001062.3-202ENST00000444409 ADAMTS4O75173 837 aa15.99■□□□□ 0.15
AP001062.3-202ENST00000444409 DUSP11O75319 330 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms