RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 KCNJ6P48051 423 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 FRMD5Q7Z6J6 570 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 SAP30BPQ9UHR5 308 aaKnown RBP17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 TANC1Q9C0D5 1861 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 FRYLO94915 3013 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 LINC01553A4QN01 128 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 ZBTB22O15209 634 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 GALR2O43603 387 aaPredicted RBP17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 HLA-DOAP06340 250 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 MSL3Q8N5Y2 521 aaKnown RBP17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 TET1Q8NFU7 2136 aa17.55■□□□□ 0.4
SYNCRIP-203ENST00000444272 PARP14Q460N5 1801 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 MCM3APO60318 1980 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 STXBP3O00186 592 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 MBTPS2O43462 519 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 CABYRO75952 493 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 SIGLEC14Q08ET2 396 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 TIGD5Q53EQ6 642 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 TCEAL5Q5H9L2 206 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 BANK1Q8NDB2 785 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 FBXO22Q8NEZ5 403 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 SIL1Q9H173 461 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 ANKRD11Q6UB99 2663 aaPredicted RBP17.54■□□□□ 0.4
SYNCRIP-203ENST00000444272 FLOT1O75955 427 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 BAIAP3O94812 1187 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 RFC2P35250 354 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 PSMC6P62333 389 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 SEZ6LQ9BYH1 1024 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 TRMT13Q9NUP7 481 aaKnown RBP17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 RAI14Q9P0K7 980 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 USP24Q9UPU5 2620 aa17.53■□□□□ 0.4
SYNCRIP-203ENST00000444272 LTBRP36941 435 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 RFX5P48382 616 aaPredicted RBP17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 NUBP1P53384 320 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 WDR5P61964 334 aaKnown RBP17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 COL19A1Q14993 1142 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 ACAP1Q15027 740 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 PTPROQ16827 1216 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 ABCB5Q2M3G0 1257 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 MAMDC4Q6UXC1 1216 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 ASIC4Q96FT7 647 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 C17orf80Q9BSJ5 609 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 CEP126Q9P2H0 1117 aa17.52■□□□□ 0.4
SYNCRIP-203ENST00000444272 DEFB103AP81534 67 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 PUM1Q14671 1186 aaKnown RBP eCLIP17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 MCTP2Q6DN12 878 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 RIOX2Q8IUF8 465 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 CABP5Q9NP86 173 aa17.51■□□□□ 0.39
SYNCRIP-203ENST00000444272 TNKSO95271 1327 aa17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 NKX3-2P78367 333 aa17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 CERKLQ49MI3 558 aaPredicted RBP17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 RAD9AQ99638 391 aa17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 ABHD16BQ9H3Z7 469 aa17.5■□□□□ 0.39
SYNCRIP-203ENST00000444272 ASTN1O14525 1302 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 EP300Q09472 2414 aaPredicted RBP17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 MYH1P12882 1939 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 IQCF3P0C7M6 154 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 SUPT20HL2P0C7V6 817 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 GUCY1A2P33402 732 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
SYNCRIP-203ENST00000444272 GJB5O95377 273 aa17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 BAG3O95817 575 aa17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 PDGFBP01127 241 aaPredicted RBP17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 SMAD4Q13485 552 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 FSCN1Q16658 493 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 PI16Q6UXB8 463 aa17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 NOL8Q76FK4 1167 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-203ENST00000444272 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 PLCG2P16885 1265 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 STAT3P40763 770 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 SEPT2Q15019 361 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 FAM117BQ6P1L5 589 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 KIAA2013Q8IYS2 634 aa17.47■□□□□ 0.39
SYNCRIP-203ENST00000444272 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
SYNCRIP-203ENST00000444272 RETREG2Q8NC44 543 aa17.46■□□□□ 0.39
SYNCRIP-203ENST00000444272 DDX11Q96FC9 970 aa17.46■□□□□ 0.39
SYNCRIP-203ENST00000444272 HMG20BQ9P0W2 317 aa17.46■□□□□ 0.39
SYNCRIP-203ENST00000444272 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms