RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-203ENST00000444191 GNGT1P63211 74 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 RASSF7Q02833 373 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-203ENST00000444191 C8orf74Q6P047 294 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-203ENST00000444191 STAG1Q8WVM7 1258 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 HAUS4Q9H6D7 363 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 PPP1R3GB7ZBB8 358 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 CSF1RP07333 972 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 TAX1BP1Q86VP1 789 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 MED15Q96RN5 788 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-203ENST00000444191 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 H7C1D1 291 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 FCER1AP12319 257 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-203ENST00000444191 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-203ENST00000444191 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 NWD1Q149M9 1564 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-203ENST00000444191 RSRC2Q7L4I2 434 aaKnown RBP12.98□□□□□ -0.33
HCFC1-203ENST00000444191 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 FAM71BQ8TC56 605 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 CCDC51Q96ER9 411 aa12.98□□□□□ -0.33
HCFC1-203ENST00000444191 MDM2Q00987 491 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-203ENST00000444191 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 XDHP47989 1333 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
HCFC1-203ENST00000444191 AMPD3Q01432 767 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-203ENST00000444191 RASGRP2Q7LDG7 609 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 RWDD2AQ9UIY3 292 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 JCADQ9P266 1359 aa12.97□□□□□ -0.33
HCFC1-203ENST00000444191 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-203ENST00000444191 TULP2O00295 520 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 PLCG1P19174 1290 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 TRIM14Q14142 442 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 CFAP58Q5T655 872 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.33
HCFC1-203ENST00000444191 FAM114A1Q8IWE2 563 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 SPAG5Q96R06 1193 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 SLIT1O75093 1534 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.33
HCFC1-203ENST00000444191 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
HCFC1-203ENST00000444191 FTCDO95954 541 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
HCFC1-203ENST00000444191 DNM2P50570 870 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 VAV2P52735 878 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 TSG101Q99816 390 aa12.96□□□□□ -0.33
HCFC1-203ENST00000444191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.96□□□□□ -0.333e-7■■■■■ 153.4
HCFC1-203ENST00000444191 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-203ENST00000444191 SMCO2A6NFE2 343 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.34
HCFC1-203ENST00000444191 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.34
HCFC1-203ENST00000444191 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.34
HCFC1-203ENST00000444191 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.34
HCFC1-203ENST00000444191 NLRP3Q96P20 1036 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.34
HCFC1-203ENST00000444191 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.34
HCFC1-203ENST00000444191 LOC102724159A0A0B4J2E5 919 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 PWP2Q15269 919 aaKnown RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 DDB1Q16531 1140 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 STK36Q9NRP7 1315 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 MECOMQ03112 1051 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 EHHADHQ08426 723 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 SV2BQ7L1I2 683 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 GJA10Q969M2 543 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 EHD4Q9H223 541 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 L1RE1Q9UN81 338 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 CYP19A1P11511 503 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-203ENST00000444191 SRLQ86TD4 932 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 SH2D3CQ8N5H7 860 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 OTUD6BQ8N6M0 293 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
HCFC1-203ENST00000444191 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms