RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 ESYT2A0FGR8 921 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 TRIM75PA6NK02 468 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 PPP1R11O60927 126 aaPredicted RBP10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 ADCY7P51828 1080 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 USP14P54578 494 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 SLC39A14Q15043 492 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 EARS2Q5JPH6 523 aaKnown RBP10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 JMYQ8N9B5 988 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 ZNF280CQ8ND82 737 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 CDCA5Q96FF9 252 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 PGBD1Q96JS3 809 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 PCDHA1Q9Y5I3 950 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 ZHX2Q9Y6X8 837 aa10.88□□□□□ -0.67
SMPD4P1-203ENST00000443839 WDR90Q96KV7 1748 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 POTECB2RU33 542 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 ADAMTS3O15072 1205 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 USP2O75604 605 aaPredicted RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 MARCKSP29966 332 aaPredicted RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 SNAP25P60880 206 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 NOM1Q5C9Z4 860 aaKnown RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 PCDHA6Q9UN73 950 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 PCDHB6Q9Y5E3 794 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 PCDHA8Q9Y5H6 950 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 CSADQ9Y600 493 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 TRAPPC10P48553 1259 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 BACE1P56817 501 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 VGLL4Q14135 290 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 USH1GQ495M9 461 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 NOL9Q5SY16 702 aaKnown RBP10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 FBXO11Q86XK2 927 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 CUL5Q93034 780 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 PCDHA7Q9UN72 937 aa10.87□□□□□ -0.67
SMPD4P1-203ENST00000443839 M0R2N6 131 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 PLA2G6O60733 806 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 VCAM1P19320 739 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 DGKZQ13574 1117 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 PTPAQ15257 358 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 TTC38Q5R3I4 469 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 KRT25Q7Z3Z0 450 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 TMEM63CQ9P1W3 806 aa10.86□□□□□ -0.67
SMPD4P1-203ENST00000443839 PPP6R2O75170 966 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 TRAF1Q13077 416 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 ADALQ6DHV7 355 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 BMP15O95972 392 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 LIG1P18858 919 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 HMGCS2P54868 508 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 NONOQ15233 471 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 ZNF174Q15697 407 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 INF2Q27J81 1249 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 ZSCAN23Q3MJ62 389 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 JAKMIP3Q5VZ66 844 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 CCDC174Q6PII3 467 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 CCDC73Q6ZRK6 1079 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 EMILIN3Q9NT22 766 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 SNCAIPQ9Y6H5 919 aa10.85□□□□□ -0.67
SMPD4P1-203ENST00000443839 C19orf81C9J6K1 198 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 FLOT1O75955 427 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 CCDC183Q5T5S1 534 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 FSIP1Q8NA03 581 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 PRPF38AQ8NAV1 312 aaKnown RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 RANBP17Q9H2T7 1088 aaKnown RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 DACT1Q9NYF0 836 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 TMOD4Q9NZQ9 345 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 OTOFQ9HC10 1997 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms