RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ZMYND8Q9ULU4 1186 aaPredicted RBP23.62■■□□□ 1.37
LRCH3-208ENST00000443727 FRMPD2Q68DX3 1309 aaPredicted RBP23.61■■□□□ 1.37
LRCH3-208ENST00000443727 DNAJC25-GNG10A0A024R161 153 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 KDM4AO75164 1064 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 RARBP10826 455 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 SLC16A2P36021 539 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 NT5C2P49902 561 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 TKFCQ3LXA3 575 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 TRERF1Q96PN7 1200 aa23.61■■□□□ 1.37
LRCH3-208ENST00000443727 ZNF536O15090 1300 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 TAL1P17542 331 aaPredicted RBP23.6■■□□□ 1.37
LRCH3-208ENST00000443727 CCDC178Q5BJE1 867 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 SYDE2Q5VT97 1194 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 TTBK2Q6IQ55 1244 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.6■■□□□ 1.37
LRCH3-208ENST00000443727 XPNPEP3Q9NQH7 507 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 CCPG1Q9ULG6 757 aa23.6■■□□□ 1.37
LRCH3-208ENST00000443727 RAD50Q92878 1312 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 SYNGAP1Q96PV0 1343 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 B4E1Z4 1266 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 POTEB2H3BUK9 544 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 AKR1A1P14550 325 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 ATN1P54259 1190 aaPredicted RBP23.59■■□□□ 1.37
LRCH3-208ENST00000443727 LRRC26Q2I0M4 334 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 ZNF467Q7Z7K2 595 aaPredicted RBP23.59■■□□□ 1.37
LRCH3-208ENST00000443727 KRT23Q9C075 422 aa23.59■■□□□ 1.37
LRCH3-208ENST00000443727 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
LRCH3-208ENST00000443727 ZHX1Q9UKY1 873 aaPredicted RBP23.59■■□□□ 1.37
LRCH3-208ENST00000443727 ZNF865P0CJ78 1059 aaPredicted RBP23.58■■□□□ 1.37
LRCH3-208ENST00000443727 PDHBP11177 359 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 SYN1P17600 705 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 MAMDC4Q6UXC1 1216 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 BTNL9Q6UXG8 535 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 DGKHQ86XP1 1220 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 CNNM2Q9H8M5 875 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 FRMPD3Q5JV73 1810 aa23.58■■□□□ 1.37
LRCH3-208ENST00000443727 PLXNA1Q9UIW2 1896 aa23.58■■□□□ 1.36
LRCH3-208ENST00000443727 ICAM1P05362 532 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 CHMLP26374 656 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 LRRC41Q15345 812 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 ZSCAN10Q96SZ4 725 aaPredicted RBP23.57■■□□□ 1.36
LRCH3-208ENST00000443727 IL25Q9H293 177 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 RANBP17Q9H2T7 1088 aaKnown RBP23.57■■□□□ 1.36
LRCH3-208ENST00000443727 KAT14Q9H8E8 782 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 A1CFQ9NQ94 594 aaKnown RBP23.57■■□□□ 1.36
LRCH3-208ENST00000443727 FAM184BQ9ULE4 1060 aa23.57■■□□□ 1.36
LRCH3-208ENST00000443727 SNAI1O95863 264 aaPredicted RBP23.56■■□□□ 1.36
LRCH3-208ENST00000443727 CNTN2Q02246 1040 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 ZNF543Q08ER8 600 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 RNF180Q86T96 592 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 UBAC1Q9BSL1 405 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.56■■□□□ 1.36
LRCH3-208ENST00000443727 ALPK3Q96L96 1907 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 TRIOBPQ9H2D6 2365 aa23.56■■□□□ 1.36
LRCH3-208ENST00000443727 PGK1P00558 417 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 ADCYAP1R1P41586 468 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 NSMFQ6X4W1 530 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 ARMCX2Q7L311 632 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 PNMA1Q8ND90 353 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 ZSWIM5Q9P217 1185 aa23.55■■□□□ 1.36
LRCH3-208ENST00000443727 TRDNQ13061 729 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 ACVR2BQ13705 512 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 MUM1L1Q5H9M0 696 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 GPATCH4Q5T3I0 446 aaKnown RBP23.54■■□□□ 1.36
LRCH3-208ENST00000443727 CCDC144CPQ8IYA2 1237 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 FAM133AQ8N9E0 248 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 FERMT2Q96AC1 680 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 LENG1Q96BZ8 264 aaPredicted RBP23.54■■□□□ 1.36
LRCH3-208ENST00000443727 ABHD16BQ9H3Z7 469 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 LAMA4Q16363 1823 aa23.54■■□□□ 1.36
LRCH3-208ENST00000443727 GOLGA8HP0CJ92 632 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 SNHG28P0DPA3 235 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 FXR1P51114 621 aaKnown RBP eCLIP23.53■■□□□ 1.36
LRCH3-208ENST00000443727 ENAHQ8N8S7 591 aaPredicted RBP23.53■■□□□ 1.36
LRCH3-208ENST00000443727 FGD4Q96M96 766 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 PNMA2Q9UL42 364 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 ATP11BQ9Y2G3 1177 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
LRCH3-208ENST00000443727 TNKSO95271 1327 aa23.53■■□□□ 1.36
LRCH3-208ENST00000443727 ASB14A6NK59 587 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 RTP1P59025 263 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 ANKS1AQ92625 1134 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 PRO3102Q9H379 93 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 CYP39A1Q9NYL5 469 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 PRKAG2Q9UGJ0 569 aa23.52■■□□□ 1.36
LRCH3-208ENST00000443727 PTH1RQ03431 593 aa23.51■■□□□ 1.35
LRCH3-208ENST00000443727 CCDC144BQ3MJ40 725 aa23.51■■□□□ 1.35
LRCH3-208ENST00000443727 SLC39A5Q6ZMH5 540 aa23.51■■□□□ 1.35
LRCH3-208ENST00000443727 SOWAHBA6NEL2 793 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 SGSM2O43147 1006 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 MAGEA10P43363 369 aaPredicted RBP23.5■■□□□ 1.35
LRCH3-208ENST00000443727 IFIT1BQ5T764 474 aaKnown RBP23.5■■□□□ 1.35
LRCH3-208ENST00000443727 NOL8Q76FK4 1167 aaKnown RBP23.5■■□□□ 1.35
LRCH3-208ENST00000443727 GDF15Q99988 308 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 UBA5Q9GZZ9 404 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 SPC25Q9HBM1 224 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 PHF24Q9UPV7 400 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 SMCHD1A6NHR9 2005 aa23.5■■□□□ 1.35
LRCH3-208ENST00000443727 A0A1W2PPC1 479 aa23.49■■□□□ 1.35
LRCH3-208ENST00000443727 PTPDC1A2A3K4 754 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms