RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 RASGRP2Q7LDG7 609 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 ZNF654Q8IZM8 581 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 CTCFLQ8NI51 663 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-211ENST00000443563 USP6NLQ92738 828 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 MMP19Q99542 508 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 APBA2Q99767 749 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-211ENST00000443563 GTF3C3Q9Y5Q9 886 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 PLXNA1Q9UIW2 1896 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-211ENST00000443563 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
HDAC6-211ENST00000443563 HOXC6P09630 235 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 CYP2B6P20813 491 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 ADORA2AP29274 412 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 GNAQP50148 359 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 ANAPC15P60006 121 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 TROAPQ12815 778 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 TRAF1Q13077 416 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 SGMS1Q86VZ5 419 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 CCPG1Q9ULG6 757 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 ZNF536O15090 1300 aa12.62□□□□□ -0.39
HDAC6-211ENST00000443563 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 HMGCRP04035 888 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 ALAS1P13196 640 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
HDAC6-211ENST00000443563 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 SH3TC2Q8TF17 1288 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 AGBL1Q96MI9 1066 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 LZTS2Q9BRK4 669 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
HDAC6-211ENST00000443563 PFASO15067 1338 aa12.61□□□□□ -0.39
HDAC6-211ENST00000443563 ELNP15502 786 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 SNAP25P60880 206 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 MAF1Q9H063 256 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-211ENST00000443563 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 RNF146Q9NTX7 359 aa12.6□□□□□ -0.39
HDAC6-211ENST00000443563 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
HDAC6-211ENST00000443563 DIS3Q9Y2L1 958 aaKnown RBP12.6□□□□□ -0.39
HDAC6-211ENST00000443563 ZBTB43O43298 467 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 INHAP05111 366 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 CAPN2P17655 700 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 RCAN1P53805 252 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-211ENST00000443563 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 Q6ZUG5 572 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 ABCB11O95342 1321 aa12.59□□□□□ -0.39
HDAC6-211ENST00000443563 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 ZBTB5O15062 677 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 COL9A3Q14050 684 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-211ENST00000443563 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 FANCBQ8NB91 859 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 TRIB2Q92519 343 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 MTMR8Q96EF0 704 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 TCEANC2Q96MN5 208 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 MYL10Q9BUA6 226 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.4
HDAC6-211ENST00000443563 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-211ENST00000443563 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.4
HDAC6-211ENST00000443563 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 COBLO75128 1261 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 CCL5P13501 91 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms