RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SPAG5Q96R06 1193 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 CCDC175P0C221 793 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 SRGNP10124 158 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 NTRK3Q16288 839 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 DCAF17Q5H9S7 520 aaPredicted RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 CNNM4Q6P4Q7 775 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 POLD4Q9HCU8 107 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 LUC7LQ9NQ29 371 aaKnown RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 BMP3P12645 472 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 IBSPP21815 317 aaPredicted RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 GRM4Q14833 912 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 FOXP2O15409 715 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
CALD1-210ENST00000443197 LRRC41Q15345 812 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 KIAA1024Q9UPX6 916 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 GPR75-ASB3A0A0A6YYF3 556 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 CUL4BQ13620 913 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
CALD1-210ENST00000443197 CHURC1Q8WUH1 139 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 POTEMA6NI47 508 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 H7C1D1 291 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 MEIS1O00470 390 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 PLCG1P19174 1290 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 CBX1P83916 185 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 MORC3Q14149 939 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 SEC23AQ15436 765 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
CALD1-210ENST00000443197 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 ZNF500O60304 480 aaPredicted RBP11.85□□□□□ -0.51
CALD1-210ENST00000443197 FLOT1O75955 427 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 AXDND1Q5T1B0 1012 aaPredicted RBP11.85□□□□□ -0.51
CALD1-210ENST00000443197 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 PHF20Q9BVI0 1012 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
CALD1-210ENST00000443197 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 MTMR4Q9NYA4 1195 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 DNM3Q9UQ16 869 aa11.85□□□□□ -0.51
CALD1-210ENST00000443197 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 ZNF569Q5MCW4 686 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 HAUS3Q68CZ6 603 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 FBXO2Q9UK22 296 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 KCNJ18B7U540 433 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 F5H6K3 240 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 KLRC3Q07444 240 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 GPS2Q13227 327 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 KCNJ12Q14500 433 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 MCM6Q14566 821 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 SPATA1Q5VX52 437 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 ZNF771Q7L3S4 317 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 BARHL2Q9NY43 387 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 BACH1O14867 736 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
CALD1-210ENST00000443197 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 PIM2Q9P1W9 311 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 IMPACTQ9P2X3 320 aa11.84□□□□□ -0.51
CALD1-210ENST00000443197 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
CALD1-210ENST00000443197 RCAN1P53805 252 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 EVCP57679 992 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 PABPC4Q13310 644 aaKnown RBP eCLIP11.83□□□□□ -0.52
CALD1-210ENST00000443197 MTERF4Q7Z6M4 381 aaKnown RBP11.83□□□□□ -0.52
CALD1-210ENST00000443197 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 USO1O60763 962 aaKnown RBP11.83□□□□□ -0.52
CALD1-210ENST00000443197 CIAPIN1Q6FI81 312 aa11.83□□□□□ -0.52
CALD1-210ENST00000443197 RDH13Q8NBN7 331 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms