RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TINF2Q9BSI4 451 aa24.73■■□□□ 1.55
CDKN3-204ENST00000442975 KAT14Q9H8E8 782 aa24.73■■□□□ 1.55
CDKN3-204ENST00000442975 CCPG1Q9ULG6 757 aa24.73■■□□□ 1.55
CDKN3-204ENST00000442975 DIS3Q9Y2L1 958 aaKnown RBP24.73■■□□□ 1.55
CDKN3-204ENST00000442975 U3KPZ7 1027 aaPredicted RBP24.73■■□□□ 1.55
CDKN3-204ENST00000442975 MYCNP04198 464 aaPredicted RBP24.72■■□□□ 1.55
CDKN3-204ENST00000442975 CCDC178Q5BJE1 867 aa24.72■■□□□ 1.55
CDKN3-204ENST00000442975 DGKHQ86XP1 1220 aa24.72■■□□□ 1.55
CDKN3-204ENST00000442975 ZSWIM5Q9P217 1185 aa24.72■■□□□ 1.55
CDKN3-204ENST00000442975 SEPT4O43236 478 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 EVI5O60447 810 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 ZNF543Q08ER8 600 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 TRDNQ13061 729 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 ENAHQ8N8S7 591 aaPredicted RBP24.71■■□□□ 1.55
CDKN3-204ENST00000442975 PNMA1Q8ND90 353 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 CCDC136Q96JN2 1154 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 TRERF1Q96PN7 1200 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 RANBP17Q9H2T7 1088 aaKnown RBP24.71■■□□□ 1.55
CDKN3-204ENST00000442975 CNPY2Q9Y2B0 182 aa24.71■■□□□ 1.55
CDKN3-204ENST00000442975 NEFLP07196 543 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 CYP21A2P08686 494 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 GOLGA8HP0CJ92 632 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 TKFCQ3LXA3 575 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 BTNL9Q6UXG8 535 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 NR2E3Q9Y5X4 410 aa24.7■■□□□ 1.54
CDKN3-204ENST00000442975 DNAJC25-GNG10A0A024R161 153 aa24.69■■□□□ 1.54
CDKN3-204ENST00000442975 ICAM1P05362 532 aa24.69■■□□□ 1.54
CDKN3-204ENST00000442975 A1CFQ9NQ94 594 aaKnown RBP24.69■■□□□ 1.54
CDKN3-204ENST00000442975 NRBP1Q9UHY1 535 aa24.69■■□□□ 1.54
CDKN3-204ENST00000442975 ZHX1Q9UKY1 873 aaPredicted RBP24.69■■□□□ 1.54
CDKN3-204ENST00000442975 PFASO15067 1338 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 POTEB2H3BUK9 544 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 SNHG28P0DPA3 235 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 GPATCH4Q5T3I0 446 aaKnown RBP24.68■■□□□ 1.54
CDKN3-204ENST00000442975 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.68■■□□□ 1.54
CDKN3-204ENST00000442975 RALYLQ86SE5 291 aaKnown RBP24.68■■□□□ 1.54
CDKN3-204ENST00000442975 C7orf61Q8IZ16 206 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 TAF6LQ9Y6J9 622 aa24.68■■□□□ 1.54
CDKN3-204ENST00000442975 SYNGAP1Q96PV0 1343 aa24.67■■□□□ 1.54
CDKN3-204ENST00000442975 BMP2KLQ5H9B9 411 aa24.67■■□□□ 1.54
CDKN3-204ENST00000442975 MUM1L1Q5H9M0 696 aa24.67■■□□□ 1.54
CDKN3-204ENST00000442975 IFIT1BQ5T764 474 aaKnown RBP24.67■■□□□ 1.54
CDKN3-204ENST00000442975 CPVLQ9H3G5 476 aa24.67■■□□□ 1.54
CDKN3-204ENST00000442975 RBM8AQ9Y5S9 174 aaKnown RBP24.67■■□□□ 1.54
CDKN3-204ENST00000442975 DNM1LO00429 736 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 RARBP10826 455 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 CNTN2Q02246 1040 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 GJC2Q5T442 439 aaPredicted RBP24.66■■□□□ 1.54
CDKN3-204ENST00000442975 NSMFQ6X4W1 530 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 CYB5R4Q7L1T6 521 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 MSL3Q8N5Y2 521 aaKnown RBP24.66■■□□□ 1.54
CDKN3-204ENST00000442975 FGD4Q96M96 766 aa24.66■■□□□ 1.54
CDKN3-204ENST00000442975 COL6A1P12109 1028 aa24.65■■□□□ 1.54
CDKN3-204ENST00000442975 ZNF467Q7Z7K2 595 aaPredicted RBP24.65■■□□□ 1.54
CDKN3-204ENST00000442975 ANKS1AQ92625 1134 aa24.65■■□□□ 1.54
CDKN3-204ENST00000442975 LENG1Q96BZ8 264 aaPredicted RBP24.65■■□□□ 1.54
CDKN3-204ENST00000442975 ESYT1Q9BSJ8 1104 aa24.65■■□□□ 1.54
CDKN3-204ENST00000442975 UBA5Q9GZZ9 404 aa24.65■■□□□ 1.54
CDKN3-204ENST00000442975 XPNPEP3Q9NQH7 507 aa24.65■■□□□ 1.54
CDKN3-204ENST00000442975 KBTBD13C9JR72 458 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 E7EWF7 191 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 DHX16O60231 1041 aaKnown RBP24.64■■□□□ 1.54
CDKN3-204ENST00000442975 ZNF865P0CJ78 1059 aaPredicted RBP24.64■■□□□ 1.54
CDKN3-204ENST00000442975 AKR1A1P14550 325 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 ASPRV1Q53RT3 343 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 MAMDC4Q6UXC1 1216 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 ARMCX2Q7L311 632 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 ARRDC4Q8NCT1 418 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 MAP4K1Q92918 833 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 SENP6Q9GZR1 1112 aaPredicted RBP24.64■■□□□ 1.54
CDKN3-204ENST00000442975 ANO2Q9NQ90 1003 aa24.64■■□□□ 1.54
CDKN3-204ENST00000442975 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.64■■□□□ 1.54
CDKN3-204ENST00000442975 CEP290O15078 2479 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 SNAI1O95863 264 aaPredicted RBP24.63■■□□□ 1.53
CDKN3-204ENST00000442975 PARP1P09874 1014 aaKnown RBP24.63■■□□□ 1.53
CDKN3-204ENST00000442975 CHRDL2Q6WN34 429 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 STOX1Q6ZVD7 989 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 FAM133AQ8N9E0 248 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 NCOA7Q8NI08 942 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 CYP39A1Q9NYL5 469 aa24.63■■□□□ 1.53
CDKN3-204ENST00000442975 NFIBO00712 420 aa24.62■■□□□ 1.53
CDKN3-204ENST00000442975 IFIT3O14879 490 aaKnown RBP24.62■■□□□ 1.53
CDKN3-204ENST00000442975 CCDC144CPQ8IYA2 1237 aa24.62■■□□□ 1.53
CDKN3-204ENST00000442975 LSG1Q9H089 658 aaKnown RBP24.62■■□□□ 1.53
CDKN3-204ENST00000442975 ZMYND8Q9ULU4 1186 aaPredicted RBP24.62■■□□□ 1.53
CDKN3-204ENST00000442975 ERICH2A1L162 156 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 PGK1P00558 417 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 ATN1P54259 1190 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-204ENST00000442975 ACVR2BQ13705 512 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 SART3Q15020 963 aaKnown RBP24.61■■□□□ 1.53
CDKN3-204ENST00000442975 SEC23AQ15436 765 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 CDC37Q16543 378 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-204ENST00000442975 LRRC26Q2I0M4 334 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 USH1GQ495M9 461 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 CHST3Q7LGC8 479 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 PNMA2Q9UL42 364 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 COLQQ9Y215 455 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-204ENST00000442975 WDR19Q8NEZ3 1342 aa24.61■■□□□ 1.53
CDKN3-204ENST00000442975 PTPDC1A2A3K4 754 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms