RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 A6NNZ2 444 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 CLGNO14967 610 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 NDUFA10O95299 355 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 MMP1P03956 469 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 SERPINB2P05120 415 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 PDE6AP16499 860 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 TUBB8Q3ZCM7 444 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 TMEM67Q5HYA8 995 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 SH3GL2Q99962 352 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 REXO2Q9Y3B8 237 aaKnown RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 B4E1Z4 1266 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 GOLGA8KD6RF30 607 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 N4BP3O15049 544 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
LTBR-203ENST00000441074 ATP1A1P05023 1023 aaKnown RBP13.32□□□□□ -0.28
LTBR-203ENST00000441074 APPP05067 770 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 KRT31Q15323 416 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 FAM84BQ96KN1 310 aaPredicted RBP13.32□□□□□ -0.28
LTBR-203ENST00000441074 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
LTBR-203ENST00000441074 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
LTBR-203ENST00000441074 ENC1O14682 589 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 MYBL2P10244 700 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 IFNAR1P17181 557 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 KRT9P35527 623 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 RCAN1P53805 252 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 GNGT1P63211 74 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 B4GALNT4Q76KP1 1039 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 AENQ8WTP8 325 aaKnown RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 GDAP1L1Q96MZ0 367 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 TRIM10Q9UDY6 481 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 MYH3P11055 1940 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 PRKAB2O43741 272 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 SPAG1Q07617 926 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 SPATS2Q86XZ4 545 aaKnown RBP13.31□□□□□ -0.28
LTBR-203ENST00000441074 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 KRT23Q9C075 422 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 PCDHB6Q9Y5E3 794 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
LTBR-203ENST00000441074 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 SMIM22K7EJ46 135 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 ZMYND10O75800 440 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 CDC25AP30304 524 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 COPB1P53618 953 aaKnown RBP13.3□□□□□ -0.28
LTBR-203ENST00000441074 SKOR1P84550 965 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
LTBR-203ENST00000441074 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 RUBCNQ92622 972 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 AIDAQ96BJ3 306 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 CABS1Q96KC9 395 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 CHP1Q99653 195 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 EHD4Q9H223 541 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 ARMT1Q9H993 441 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.28
LTBR-203ENST00000441074 LRP2BPQ9P2M1 347 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 LRP5O75197 1615 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 OPA1O60313 960 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 SRGAP2O75044 1071 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 EPB41P11171 864 aaKnown RBP13.3□□□□□ -0.28
LTBR-203ENST00000441074 AFMP43652 599 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 FNTAP49354 379 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 DPYDQ12882 1025 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 NLGN1Q8N2Q7 840 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 SLC16A10Q8TF71 515 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 JAKMIP2Q96AA8 810 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 STRBPQ96SI9 672 aaKnown RBP13.3□□□□□ -0.28
LTBR-203ENST00000441074 CHD4Q14839 1912 aa13.3□□□□□ -0.28
LTBR-203ENST00000441074 MYH8P13535 1937 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 PATL2C9JE40 543 aaKnown RBP13.29□□□□□ -0.28
LTBR-203ENST00000441074 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms