RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 ARMCX2Q7L311 632 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 KLHDC9Q8NEP7 349 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 MYLIPQ8WY64 445 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 VTI1AQ96AJ9 217 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 PCDHB15Q9Y5E8 787 aa20.35■□□□□ 0.85
FAM20B-202ENST00000440702 MOXD2PA6NHM9 499 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 DUSP11O75319 330 aaKnown RBP20.34■□□□□ 0.85
FAM20B-202ENST00000440702 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
FAM20B-202ENST00000440702 SNAP25P60880 206 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 CNTN2Q02246 1040 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 CCDC144BQ3MJ40 725 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 ZNF467Q7Z7K2 595 aaPredicted RBP20.34■□□□□ 0.85
FAM20B-202ENST00000440702 CHST13Q8NET6 341 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 TTYH1Q9H313 450 aaPredicted RBP20.34■□□□□ 0.85
FAM20B-202ENST00000440702 MTMR7Q9Y216 660 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 EYSQ5T1H1 3165 aa20.34■□□□□ 0.85
FAM20B-202ENST00000440702 STAT2P52630 851 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 ZMYM1Q5SVZ6 1142 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 CCSAPQ6IQ19 270 aaPredicted RBP20.33■□□□□ 0.85
FAM20B-202ENST00000440702 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 CCDC144CPQ8IYA2 1237 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 MAFAQ8NHW3 353 aaPredicted RBP20.33■□□□□ 0.85
FAM20B-202ENST00000440702 AGBL1Q96MI9 1066 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 ACAD9Q9H845 621 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 INCENPQ9NQS7 918 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 RNF146Q9NTX7 359 aa20.33■□□□□ 0.85
FAM20B-202ENST00000440702 ASGR1P07306 291 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 MX1P20591 662 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 MCCP23508 829 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 SLC1A4P43007 532 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 OAZ1P54368 228 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 KCTD1Q719H9 257 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.32■□□□□ 0.844e-8■■■■■ 27.2
FAM20B-202ENST00000440702 ANKRD33Q7Z3H0 272 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 GLT1D1Q96MS3 346 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 ABHD16BQ9H3Z7 469 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 SPC25Q9HBM1 224 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 SYNPO2Q9UMS6 1093 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 LRRC37A2A6NM11 1700 aa20.32■□□□□ 0.84
FAM20B-202ENST00000440702 NMT2O60551 498 aa20.31■□□□□ 0.84
FAM20B-202ENST00000440702 CST5P28325 142 aaPredicted RBP20.31■□□□□ 0.84
FAM20B-202ENST00000440702 GNASQ5JWF2 1037 aa20.31■□□□□ 0.84
FAM20B-202ENST00000440702 NOL8Q76FK4 1167 aaKnown RBP20.31■□□□□ 0.84
FAM20B-202ENST00000440702 TOX2Q96NM4 488 aa20.31■□□□□ 0.84
FAM20B-202ENST00000440702 COL25A1Q9BXS0 654 aaPredicted RBP20.31■□□□□ 0.84
FAM20B-202ENST00000440702 UPF3AQ9H1J1 476 aaKnown RBP20.31■□□□□ 0.84
FAM20B-202ENST00000440702 STX8Q9UNK0 236 aa20.31■□□□□ 0.84
FAM20B-202ENST00000440702 DDX49Q9Y6V7 483 aaKnown RBP20.31■□□□□ 0.84
FAM20B-202ENST00000440702 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.3■□□□□ 0.84
FAM20B-202ENST00000440702 TSPY2A6NKD2 308 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 ALAS1P13196 640 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 GJA9P57773 515 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 BEX3Q00994 111 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 FAM160B2Q86V87 743 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 PCSK9Q8NBP7 692 aaKnown RBP20.3■□□□□ 0.84
FAM20B-202ENST00000440702 CHURC1Q8WUH1 139 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 STAG1Q8WVM7 1258 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 GMCL1Q96IK5 515 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 A1CFQ9NQ94 594 aaKnown RBP20.3■□□□□ 0.84
FAM20B-202ENST00000440702 PRUNE2Q8WUY3 3088 aa20.3■□□□□ 0.84
FAM20B-202ENST00000440702 ZNF536O15090 1300 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 LCTP09848 1927 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 A0A0U1RQG5 324 aaPredicted RBP20.29■□□□□ 0.84
FAM20B-202ENST00000440702 FOXP2O15409 715 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 TIMP1P01033 207 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 FOSL2P15408 326 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 PTGS1P23219 599 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 TRERF1Q96PN7 1200 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 KATNBL1Q9H079 304 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 TBX21Q9UL17 535 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.29■□□□□ 0.84
FAM20B-202ENST00000440702 MYO9BQ13459 2157 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 CDH23Q9H251 3354 aa20.29■□□□□ 0.84
FAM20B-202ENST00000440702 ELP1O95163 1332 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 MROH7Q68CQ1 1323 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 SOWAHBA6NEL2 793 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 RANBP6O60518 1105 aaKnown RBP20.28■□□□□ 0.84
FAM20B-202ENST00000440702 FDX1P10109 184 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 CCDC96Q2M329 555 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 FAM133AQ8N9E0 248 aa20.28■□□□□ 0.84
FAM20B-202ENST00000440702 ARVCFO00192 962 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 TNFAIP2Q03169 654 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.841e-7■■□□□ 13.2
FAM20B-202ENST00000440702 IL17RBQ9NRM6 502 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
FAM20B-202ENST00000440702 PRR12Q9ULL5 1215 aa20.27■□□□□ 0.84
FAM20B-202ENST00000440702 ASTN1O14525 1302 aa20.27■□□□□ 0.83
FAM20B-202ENST00000440702 CTAGE5O15320 804 aa20.26■□□□□ 0.83
FAM20B-202ENST00000440702 DNAJB2P25686 324 aa20.26■□□□□ 0.83
FAM20B-202ENST00000440702 CDK7P50613 346 aa20.26■□□□□ 0.83
FAM20B-202ENST00000440702 PPIGQ13427 754 aaKnown RBP eCLIP20.26■□□□□ 0.83
FAM20B-202ENST00000440702 TKFCQ3LXA3 575 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms