RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 KIFC2Q96AC6 838 aa24.67■■□□□ 1.54
TRIM39-210ENST00000440271 STRBPQ96SI9 672 aaKnown RBP24.67■■□□□ 1.54
TRIM39-210ENST00000440271 SLC38A10Q9HBR0 1119 aa24.67■■□□□ 1.54
TRIM39-210ENST00000440271 TLR3O15455 904 aaKnown RBP24.66■■□□□ 1.54
TRIM39-210ENST00000440271 COL9A1P20849 921 aa24.66■■□□□ 1.54
TRIM39-210ENST00000440271 ARMCX2Q7L311 632 aa24.66■■□□□ 1.54
TRIM39-210ENST00000440271 CHST13Q8NET6 341 aa24.66■■□□□ 1.54
TRIM39-210ENST00000440271 ZBTB40Q9NUA8 1239 aa24.66■■□□□ 1.54
TRIM39-210ENST00000440271 FBXO40Q9UH90 709 aa24.66■■□□□ 1.54
TRIM39-210ENST00000440271 GREB1LQ9C091 1923 aaPredicted RBP24.65■■□□□ 1.54
TRIM39-210ENST00000440271 GSG1L2A8MUP6 293 aa24.65■■□□□ 1.54
TRIM39-210ENST00000440271 CTAGE5O15320 804 aa24.65■■□□□ 1.54
TRIM39-210ENST00000440271 MS4A1P11836 297 aa24.65■■□□□ 1.54
TRIM39-210ENST00000440271 ASB2Q96Q27 587 aa24.65■■□□□ 1.54
TRIM39-210ENST00000440271 MSRAQ9UJ68 235 aa24.65■■□□□ 1.54
TRIM39-210ENST00000440271 IGKV6D-41A0A0C4DH26 115 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 MINDY4BA8MYZ0 360 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 CD4P01730 458 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 CYP2C18P33260 490 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 NKX3-2P78367 333 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 ADGRE1Q14246 886 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 CCDC144CPQ8IYA2 1237 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 HERVK_113Q902F9 699 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 MKL1Q969V6 931 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 KATNBL1Q9H079 304 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 IL23AQ9NPF7 189 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 THEGQ9P2T0 379 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 FEM1BQ9UK73 627 aa24.64■■□□□ 1.54
TRIM39-210ENST00000440271 MUC3AQ02505 3323 aa24.64■■□□□ 1.53
TRIM39-210ENST00000440271 OAZ1P54368 228 aa24.63■■□□□ 1.53
TRIM39-210ENST00000440271 BEX3Q00994 111 aa24.63■■□□□ 1.53
TRIM39-210ENST00000440271 RAB30Q15771 203 aa24.63■■□□□ 1.53
TRIM39-210ENST00000440271 GIMAP6Q6P9H5 292 aa24.63■■□□□ 1.53
TRIM39-210ENST00000440271 CXXC1Q9P0U4 656 aaPredicted RBP24.63■■□□□ 1.53
TRIM39-210ENST00000440271 MYO9BQ13459 2157 aa24.62■■□□□ 1.53
TRIM39-210ENST00000440271 FGBP02675 491 aa24.62■■□□□ 1.53
TRIM39-210ENST00000440271 CCDC85BQ15834 202 aaPredicted RBP24.62■■□□□ 1.53
TRIM39-210ENST00000440271 DDX19BQ9UMR2 479 aa24.62■■□□□ 1.53
TRIM39-210ENST00000440271 COG6Q9Y2V7 657 aa24.62■■□□□ 1.53
TRIM39-210ENST00000440271 CHD9Q3L8U1 2897 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 IGFBP4P22692 258 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 MRPS5P82675 430 aaKnown RBP24.61■■□□□ 1.53
TRIM39-210ENST00000440271 CNTN2Q02246 1040 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 TNFAIP2Q03169 654 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 ZNF444Q8N0Y2 327 aaPredicted RBP24.61■■□□□ 1.53
TRIM39-210ENST00000440271 SLC43A3Q8NBI5 491 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 NKX2-4Q9H2Z4 354 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 HOMER2Q9NSB8 354 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 MTMR4Q9NYA4 1195 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 MYH7P12883 1935 aa24.61■■□□□ 1.53
TRIM39-210ENST00000440271 MCM3APO60318 1980 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.6■■□□□ 1.53
TRIM39-210ENST00000440271 CXCL17Q6UXB2 119 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 NOL8Q76FK4 1167 aaKnown RBP24.6■■□□□ 1.53
TRIM39-210ENST00000440271 ADAMTS19Q8TE59 1207 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 CEP95Q96GE4 821 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 MTIF3Q9H2K0 278 aaKnown RBP24.6■■□□□ 1.53
TRIM39-210ENST00000440271 SLC28A3Q9HAS3 691 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 SYNPO2Q9UMS6 1093 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 ASTN1O14525 1302 aa24.6■■□□□ 1.53
TRIM39-210ENST00000440271 PRDM1O75626 825 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 FAM133AQ8N9E0 248 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 GMCL1P1Q8NEA9 526 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 OSBP2Q969R2 916 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 LRRCC1Q9C099 1032 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 HIPK3Q9H422 1215 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 GNEQ9Y223 722 aaKnown RBP24.59■■□□□ 1.53
TRIM39-210ENST00000440271 YBX2Q9Y2T7 364 aaKnown RBP24.59■■□□□ 1.53
TRIM39-210ENST00000440271 UMODL1Q5DID0 1318 aa24.59■■□□□ 1.53
TRIM39-210ENST00000440271 CABYRO75952 493 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 TTLL1O95922 423 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 ITGA7Q13683 1181 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 OTOP2Q7RTS6 562 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 LRRC47Q8N1G4 583 aaKnown RBP24.58■■□□□ 1.53
TRIM39-210ENST00000440271 ACAD9Q9H845 621 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 ZNF287Q9HBT7 754 aa24.58■■□□□ 1.53
TRIM39-210ENST00000440271 SOWAHBA6NEL2 793 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 SMARCA5O60264 1052 aaPredicted RBP24.57■■□□□ 1.52
TRIM39-210ENST00000440271 FDX1P10109 184 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 BMP3P12645 472 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 SLFN13Q68D06 897 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 EPB41L4AQ9HCS5 686 aaPredicted RBP24.57■■□□□ 1.52
TRIM39-210ENST00000440271 A1CFQ9NQ94 594 aaKnown RBP24.57■■□□□ 1.52
TRIM39-210ENST00000440271 ECHDC1Q9NTX5 307 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 RAPGEFL1Q9UHV5 662 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 GRIN2DO15399 1336 aa24.57■■□□□ 1.52
TRIM39-210ENST00000440271 ASB14A6NK59 587 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 TMEM232C9JQI7 657 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 CCL23P55773 120 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 FSCN1Q16658 493 aaKnown RBP24.56■■□□□ 1.52
TRIM39-210ENST00000440271 TLK2Q86UE8 772 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 KBTBD3Q8NAB2 608 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 APPBP2Q92624 585 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 UHRF1Q96T88 793 aaPredicted RBP24.56■■□□□ 1.52
TRIM39-210ENST00000440271 AP5M1Q9H0R1 490 aa24.56■■□□□ 1.52
TRIM39-210ENST00000440271 MYH4Q9Y623 1939 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 DYNC1LI2O43237 492 aaPredicted RBP24.55■■□□□ 1.52
TRIM39-210ENST00000440271 TDO2P48775 406 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 AGBL1Q96MI9 1066 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 NOC4LQ9BVI4 516 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms