RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 TNNC1P63316 161 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 PDE4DQ08499 809 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-202ENST00000439986 FAM204AQ9H8W3 233 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 DDX41Q9UJV9 622 aaKnown RBP12.72□□□□□ -0.37
CCBE1-202ENST00000439986 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-202ENST00000439986 CSPG5O95196 566 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 KRT19P08727 400 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 LMNB1P20700 586 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 TERF2Q15554 542 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
CCBE1-202ENST00000439986 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 TXKP42681 527 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 B4GALNT4Q76KP1 1039 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 SND1Q7KZF4 910 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCBE1-202ENST00000439986 MIER3Q7Z3K6 550 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 DPF3Q92784 378 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 SAMD15Q9P1V8 674 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 SUFUQ9UMX1 484 aa12.72□□□□□ -0.37
CCBE1-202ENST00000439986 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 PRDM1O75626 825 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 TNFAIP3P21580 790 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 PHLPP2Q6ZVD8 1323 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 IKBKBO14920 756 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 FGAP02671 866 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 MRPS35P82673 323 aaKnown RBP12.71□□□□□ -0.37
CCBE1-202ENST00000439986 TOMM20Q15388 145 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 TPTE2Q6XPS3 522 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 NACA2Q9H009 215 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 ZNF532Q9HCE3 1301 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 A1BGP04217 495 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
CCBE1-202ENST00000439986 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCBE1-202ENST00000439986 MTRF1LQ9UGC7 380 aaKnown RBP12.71□□□□□ -0.37
CCBE1-202ENST00000439986 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.38
CCBE1-202ENST00000439986 TRPC3Q13507 836 aa12.71□□□□□ -0.38
CCBE1-202ENST00000439986 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.38
CCBE1-202ENST00000439986 GOLGA5Q8TBA6 731 aa12.71□□□□□ -0.38
CCBE1-202ENST00000439986 NELFBQ8WX92 580 aa12.71□□□□□ -0.38
CCBE1-202ENST00000439986 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.38
CCBE1-202ENST00000439986 ATP8B1O43520 1251 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 DYMQ7RTS9 669 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 DDHD2O94830 711 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 DMPKQ09013 629 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 CALCOCO2Q13137 446 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 INTS8Q75QN2 995 aaKnown RBP12.7□□□□□ -0.38
CCBE1-202ENST00000439986 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 PLCD1P51178 756 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 OLR1P78380 273 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 MAP3K4Q9Y6R4 1608 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 SART1O43290 800 aaKnown RBP12.7□□□□□ -0.38
CCBE1-202ENST00000439986 E2F5Q15329 346 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 ASIC2Q16515 512 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 GATAD2AQ86YP4 633 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 PGBD1Q96JS3 809 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
CCBE1-202ENST00000439986 HOXA2O43364 376 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 CIB2O75838 187 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 STRN3Q13033 797 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 PALMDQ9NP74 551 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 KRT82Q9NSB4 513 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 MYO1AQ9UBC5 1043 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 MED14O60244 1454 aa12.7□□□□□ -0.38
CCBE1-202ENST00000439986 IL2RBP14784 551 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PTPROQ16827 1216 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PLA2G4DQ86XP0 818 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 XAB2Q9HCS7 855 aaKnown RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 GNA11P29992 359 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 OLFML1Q6UWY5 402 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 ZMYM6O95789 1325 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PNMA6AP0CW24 399 aaPredicted RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 SRGAP1Q7Z6B7 1085 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms