RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 TTC24A2A3L6 582 aaPredicted RBP8.85□□□□□ -0.99
COPS3-203ENST00000439936 PDHXO00330 501 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 CA12O43570 354 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 HSPA8P11142 646 aaKnown RBP8.85□□□□□ -0.99
COPS3-203ENST00000439936 RFC5P40937 340 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 CTCFP49711 727 aaPredicted RBP8.85□□□□□ -0.99
COPS3-203ENST00000439936 LBX1P52954 281 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 HMGCS2P54868 508 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 TFAP4Q01664 338 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 DGKZQ13574 1117 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 AKNAD1Q5T1N1 836 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 ANKRD23Q86SG2 305 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 CLEC10AQ8IUN9 316 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 NEDD1Q8NHV4 660 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 SAGE1Q9NXZ1 904 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 CTNNA3Q9UI47 895 aa8.85□□□□□ -0.99
COPS3-203ENST00000439936 IGKV6D-41A0A0C4DH26 115 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 ORC4O43929 436 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 CDC45O75419 566 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 EEF2P13639 858 aaKnown RBP8.84□□□□□ -0.99
COPS3-203ENST00000439936 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
COPS3-203ENST00000439936 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
COPS3-203ENST00000439936 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 MFSD6Q6ZSS7 791 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 KIAA1211Q6ZU35 1233 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 LSG1Q9H089 658 aaKnown RBP8.84□□□□□ -0.99
COPS3-203ENST00000439936 KIAA1683Q9H0B3 1180 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
COPS3-203ENST00000439936 NYAP2Q9P242 653 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 CLIP2Q9UDT6 1046 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 TMX2Q9Y320 296 aa8.84□□□□□ -0.99
COPS3-203ENST00000439936 CFAP99D6REC4 459 aa8.83□□□□□ -1
COPS3-203ENST00000439936 GPR25O00155 361 aa8.83□□□□□ -1
COPS3-203ENST00000439936 RANBP6O60518 1105 aaKnown RBP8.83□□□□□ -1
COPS3-203ENST00000439936 CYP21A2P08686 494 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TSPY3P0CV98 308 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TSPY8P0CW00 308 aa8.83□□□□□ -1
COPS3-203ENST00000439936 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
COPS3-203ENST00000439936 USP14P54578 494 aa8.83□□□□□ -1
COPS3-203ENST00000439936 ATP2B2Q01814 1243 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TRIM32Q13049 653 aa8.83□□□□□ -1
COPS3-203ENST00000439936 CRHR2Q13324 411 aa8.83□□□□□ -1
COPS3-203ENST00000439936 IMMTQ16891 758 aaKnown RBP8.83□□□□□ -1
COPS3-203ENST00000439936 RRP12Q5JTH9 1297 aaKnown RBP8.83□□□□□ -1
COPS3-203ENST00000439936 KIAA1755Q5JYT7 1200 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TREML2Q5T2D2 321 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TBC1D10CQ8IV04 446 aa8.83□□□□□ -1
COPS3-203ENST00000439936 STAG1Q8WVM7 1258 aa8.83□□□□□ -1
COPS3-203ENST00000439936 IL17RBQ9NRM6 502 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TOMM22Q9NS69 142 aa8.83□□□□□ -1
COPS3-203ENST00000439936 MTMR4Q9NYA4 1195 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TMOD4Q9NZQ9 345 aa8.83□□□□□ -1
COPS3-203ENST00000439936 AGTPBP1Q9UPW5 1226 aa8.83□□□□□ -1
COPS3-203ENST00000439936 GREB1LQ9C091 1923 aaPredicted RBP8.83□□□□□ -1
COPS3-203ENST00000439936 MYH4Q9Y623 1939 aa8.83□□□□□ -1
COPS3-203ENST00000439936 TSPY2A6NKD2 308 aa8.82□□□□□ -1
COPS3-203ENST00000439936 NMT2O60551 498 aa8.82□□□□□ -1
COPS3-203ENST00000439936 TLR2O60603 784 aa8.82□□□□□ -1
COPS3-203ENST00000439936 CYP2C8P10632 490 aa8.82□□□□□ -1
COPS3-203ENST00000439936 ICA1Q05084 483 aa8.82□□□□□ -1
COPS3-203ENST00000439936 NECTIN1Q15223 517 aa8.82□□□□□ -1
COPS3-203ENST00000439936 CASC1Q6TDU7 716 aa8.82□□□□□ -1
COPS3-203ENST00000439936 RETREG3Q86VR2 466 aa8.82□□□□□ -1
COPS3-203ENST00000439936 MKL1Q969V6 931 aa8.82□□□□□ -1
COPS3-203ENST00000439936 CEP95Q96GE4 821 aa8.82□□□□□ -1
COPS3-203ENST00000439936 C12orf42Q96LP6 360 aa8.82□□□□□ -1
COPS3-203ENST00000439936 P2RX7Q99572 595 aaKnown RBP8.82□□□□□ -1
COPS3-203ENST00000439936 FEZ1Q99689 392 aa8.82□□□□□ -1
COPS3-203ENST00000439936 RNF41Q9H4P4 317 aaPredicted RBP8.82□□□□□ -1
COPS3-203ENST00000439936 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
COPS3-203ENST00000439936 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
COPS3-203ENST00000439936 SLC45A1Q9Y2W3 748 aa8.82□□□□□ -1
COPS3-203ENST00000439936 RBM8AQ9Y5S9 174 aaKnown RBP8.82□□□□□ -1
COPS3-203ENST00000439936 TAF6LQ9Y6J9 622 aa8.82□□□□□ -1
COPS3-203ENST00000439936 B4E1Z4 1266 aa8.81□□□□□ -1
COPS3-203ENST00000439936 PCP11498 1178 aaKnown RBP8.81□□□□□ -1
COPS3-203ENST00000439936 SKOR1P84550 965 aa8.81□□□□□ -1
COPS3-203ENST00000439936 NOM1Q5C9Z4 860 aaKnown RBP8.81□□□□□ -1
COPS3-203ENST00000439936 C17orf99Q6UX52 265 aa8.81□□□□□ -1
COPS3-203ENST00000439936 CATSPERGQ6ZRH7 1159 aa8.81□□□□□ -1
COPS3-203ENST00000439936 SNIP1Q8TAD8 396 aaKnown RBP8.81□□□□□ -1
COPS3-203ENST00000439936 PRR7Q8TB68 274 aa8.81□□□□□ -1
COPS3-203ENST00000439936 ZNF296Q8WUU4 475 aaPredicted RBP8.81□□□□□ -1
COPS3-203ENST00000439936 ASCC2Q9H1I8 757 aaPredicted RBP8.81□□□□□ -1
COPS3-203ENST00000439936 VCPKMTQ9H867 229 aa8.81□□□□□ -1
COPS3-203ENST00000439936 ANO2Q9NQ90 1003 aa8.81□□□□□ -1
COPS3-203ENST00000439936 PRDM10Q9NQV6 1147 aa8.81□□□□□ -1
COPS3-203ENST00000439936 TCP11L1Q9NUJ3 509 aa8.81□□□□□ -1
COPS3-203ENST00000439936 CPA4Q9UI42 421 aa8.81□□□□□ -1
COPS3-203ENST00000439936 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L15C9J2P7 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L11C9JVI0 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L18D6R9N7 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L22D6RA61 530 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms