RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ZSCAN5CA6NGD5 496 aaPredicted RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 HERVK_113P62684 666 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 AMPD2Q01433 879 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 NEDD9Q14511 834 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 MAFGO15525 162 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 PDE6AP16499 860 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 NTRK3Q16288 839 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 ZNF654Q8IZM8 581 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 FANCBQ8NB91 859 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 FAXDC2Q96IV6 333 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 ALS2CR12Q96Q35 445 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
SMPD4-209ENST00000439886 CACNA1FO60840 1977 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 IFNAR1P17181 557 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 PHKA1P46020 1223 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 TRIM14Q14142 442 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 CABLES1Q8TDN4 633 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 ORAI2Q96SN7 254 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 NOC4LQ9BVI4 516 aaKnown RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 PICK1Q9NRD5 415 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 STRN4Q9NRL3 753 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
SMPD4-209ENST00000439886 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 UBA7P41226 1012 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 MB21D1Q8N884 522 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 ZIM3Q96PE6 472 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 FOXP1Q9H334 677 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 BAIAP2L1Q9UHR4 511 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 MEFVO15553 781 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 RBBP5Q15291 538 aaKnown RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 TRIM74Q86UV6 250 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
SMPD4-209ENST00000439886 CRACR2BQ8N4Y2 399 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-209ENST00000439886 PSMA7O14818 248 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 HDLBPQ00341 1268 aaKnown RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 DNAJC14Q6Y2X3 702 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 CPDO75976 1380 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 SPATA31D1Q6ZQQ2 1576 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 PP2D1A8MPX8 630 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 WNT7AO00755 349 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 SKAP2O75563 359 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 MAGEA1P43355 309 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 INHBEP58166 350 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 MTA1Q13330 715 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 RPGRIP1Q96KN7 1286 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 KLC4Q9NSK0 619 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 PXDNQ92626 1479 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 EIF4E1BA6NMX2 242 aaKnown RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 EZRP15311 586 aaKnown RBP12.98□□□□□ -0.33
SMPD4-209ENST00000439886 NR1D1P20393 614 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 ADD2P35612 726 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 KRT12Q99456 494 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 TUBGCP2Q9BSJ2 902 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 KRT23Q9C075 422 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 NLRC4Q9NPP4 1024 aa12.98□□□□□ -0.33
SMPD4-209ENST00000439886 MYH8P13535 1937 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 H7C1W4 665 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 PSMD14O00487 310 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 HEXIM1O94992 359 aaKnown RBP12.97□□□□□ -0.33
SMPD4-209ENST00000439886 CARSP49589 748 aaKnown RBP12.97□□□□□ -0.33
SMPD4-209ENST00000439886 RASSF7Q02833 373 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-209ENST00000439886 ANKLE2Q86XL3 938 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
SMPD4-209ENST00000439886 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms