RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 LAMB1P07942 1786 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 MEA1Q16626 185 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 C10orf67Q8IYJ2 551 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 SYF2O95926 243 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 SCG2P13521 617 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 MCM7P33993 719 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-202ENST00000439510 PRPF6O94906 941 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 ATP1A1P05023 1023 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 MMS19Q96T76 1030 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 THAP9Q9H5L6 903 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 KCNB1Q14721 858 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 CCDC152Q4G0S7 254 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 HPCAL4Q9UM19 191 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 MAPK8IP1Q9UQF2 711 aa17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-202ENST00000439510 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 VGLL3A8MV65 326 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 ENC1O14682 589 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 RNF40O75150 1001 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 PHACTR2O75167 634 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 NLRP5P59047 1200 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 KRT83P78385 493 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 CCDC122Q5T0U0 273 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 LRRC31Q6UY01 552 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 CHRNDQ07001 517 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 CKAP4Q07065 602 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 FOXR1Q6PIV2 292 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 DISC1Q9NRI5 854 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 RXRBP28702 533 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 STAT6P42226 847 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 PMS1P54277 932 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 TTYH3Q9C0H2 523 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
CDC42EP4-202ENST00000439510 MYH1P12882 1939 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 MYL1P05976 194 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 CTR9Q6PD62 1173 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 ZBTB9Q96C00 473 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 KRT86O43790 486 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 ORC4O43929 436 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 DNM2P50570 870 aa17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-202ENST00000439510 KLRC4O43908 158 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 SRGNP10124 158 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 RSPH14Q9UHP6 348 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 COL4A1P02462 1669 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 CALML3P27482 149 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
CDC42EP4-202ENST00000439510 RHOBTB3O94955 611 aa17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 CYLC1P35663 651 aaPredicted RBP17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 TTI2Q6NXR4 508 aa17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.33
CDC42EP4-202ENST00000439510 EIF3CLB5ME19 914 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 KIAA1328Q86T90 577 aa17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 EIF3CQ99613 913 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 NUP58Q9BVL2 599 aa17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 TFR2Q9UP52 801 aa17.08■□□□□ 0.32
CDC42EP4-202ENST00000439510 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 PSMA7O14818 248 aa17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 TNNT3P45378 269 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 STIM1Q13586 685 aa17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 CNPY4Q8N129 248 aa17.07■□□□□ 0.32
CDC42EP4-202ENST00000439510 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms