RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FGD4Q96M96 766 aa16.31■□□□□ 0.2
PRAME-209ENST00000439106 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
PRAME-209ENST00000439106 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
PRAME-209ENST00000439106 RNF146Q9NTX7 359 aa16.31■□□□□ 0.2
PRAME-209ENST00000439106 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
PRAME-209ENST00000439106 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 MSCO60682 206 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 ALAS1P13196 640 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
PRAME-209ENST00000439106 OAZ1P54368 228 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 ESR2Q92731 530 aa16.3■□□□□ 0.2
PRAME-209ENST00000439106 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
PRAME-209ENST00000439106 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
PRAME-209ENST00000439106 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
PRAME-209ENST00000439106 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
PRAME-209ENST00000439106 PDHBP11177 359 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 CHMLP26374 656 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
PRAME-209ENST00000439106 CHST13Q8NET6 341 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
PRAME-209ENST00000439106 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
PRAME-209ENST00000439106 DNM1LO00429 736 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 PLA2G6O60733 806 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
PRAME-209ENST00000439106 ZNF865P0CJ78 1059 aaPredicted RBP16.28■□□□□ 0.2
PRAME-209ENST00000439106 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
PRAME-209ENST00000439106 PTH1RQ03431 593 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 FBXO40Q9UH90 709 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
PRAME-209ENST00000439106 SZT2Q5T011 3432 aa16.28■□□□□ 0.2
PRAME-209ENST00000439106 RAD50Q92878 1312 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 PGK1P00558 417 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 FDX1P10109 184 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 ZNF543Q08ER8 600 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 LRRC41Q15345 812 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRAME-209ENST00000439106 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 PURBQ96QR8 312 aaKnown RBP16.27■□□□□ 0.2
PRAME-209ENST00000439106 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
PRAME-209ENST00000439106 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
PRAME-209ENST00000439106 ASTN1O14525 1302 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 TNKSO95271 1327 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 KBTBD13C9JR72 458 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 ADCY6O43306 1168 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.198e-8■□□□□ 9
PRAME-209ENST00000439106 IRX5P78411 483 aaPredicted RBP16.26■□□□□ 0.19
PRAME-209ENST00000439106 BTNL9Q6UXG8 535 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 NSMFQ6X4W1 530 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 ARMCX2Q7L311 632 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 TTC14Q96N46 770 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 XPNPEP3Q9NQH7 507 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
PRAME-209ENST00000439106 ZSWIM5Q9P217 1185 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 CTNNA3Q9UI47 895 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 LAMA3Q16787 3333 aa16.26■□□□□ 0.19
PRAME-209ENST00000439106 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 ICAM1P05362 532 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 RARBP10826 455 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 AKR1A1P14550 325 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 CCDC144CPQ8IYA2 1237 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
PRAME-209ENST00000439106 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 PNMA1Q8ND90 353 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 ZSCAN10Q96SZ4 725 aaPredicted RBP16.25■□□□□ 0.19
PRAME-209ENST00000439106 UBA5Q9GZZ9 404 aa16.25■□□□□ 0.19
PRAME-209ENST00000439106 SYNRGQ9UMZ2 1314 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 KIAA1217Q5T5P2 1943 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 MYADML2A6NDP7 307 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 NFIBO00712 420 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 SGSM2O43147 1006 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 CYP21A2P08686 494 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 PTGS1P23219 599 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 ADCYAP1R1P41586 468 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 TKFCQ3LXA3 575 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
PRAME-209ENST00000439106 DGKHQ86XP1 1220 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
PRAME-209ENST00000439106 RTP1P59025 263 aa16.23■□□□□ 0.19
PRAME-209ENST00000439106 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
PRAME-209ENST00000439106 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
PRAME-209ENST00000439106 KRT23Q9C075 422 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms