RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 ZBTB22O15209 634 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 LUC7L2Q9Y383 392 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 SRPRBQ9Y5M8 271 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 PPP1R2P41236 205 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 LONRF3Q496Y0 759 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 MIGA2Q7L4E1 593 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 TMOD4Q9NZQ9 345 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 WTIPA6NIX2 430 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 ELF2Q15723 593 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 PFKFB3Q16875 520 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 NELFBQ8WX92 580 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 PAXBP1Q9Y5B6 917 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 ERCC3P19447 782 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 USP8P40818 1118 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 SCLT1Q96NL6 688 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 BAG1Q99933 345 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 GOLPH3LQ9H4A5 285 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 TAB2Q9NYJ8 693 aa12.93□□□□□ -0.34
TRAPPC9-202ENST00000438773 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 GH2P01242 217 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 PTPN21Q16825 1174 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 TBC1D7Q9P0N9 293 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 DNM3Q9UQ16 869 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 CCDC175P0C221 793 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 BMP3P12645 472 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 PTPREP23469 700 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 NOC4LQ9BVI4 516 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 ZBED4O75132 1171 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 ALAS1P13196 640 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 IQCB1Q15051 598 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 CNGA4Q8IV77 575 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
TRAPPC9-202ENST00000438773 BACH1O14867 736 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 TAF4BQ92750 862 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 CACNA1FO60840 1977 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 ARID5AQ03989 594 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 BICD1Q96G01 975 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 RIOK1Q9BRS2 568 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 NT5C3AQ9H0P0 336 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 IMPACTQ9P2X3 320 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 PUF60Q9UHX1 559 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 FLT1P17948 1338 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 MRC1P22897 1456 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 AKR1B1P15121 316 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 SEPT2Q15019 361 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 C10orf67Q8IYJ2 551 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 POLLQ9UGP5 575 aa12.91□□□□□ -0.34
TRAPPC9-202ENST00000438773 FBXO38Q6PIJ6 1188 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 GSDMAQ96QA5 445 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 MPHOSPH6Q99547 160 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 ERLIN1O75477 346 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 FMR1NBQ8N0W7 255 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms