RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 CCDC144BQ3MJ40 725 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 PCSK9Q8NBP7 692 aaKnown RBP22.79■■□□□ 1.24
MUC1-211ENST00000438413 SPC25Q9HBM1 224 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 ELP1O95163 1332 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 MROH7Q68CQ1 1323 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 PLIN4Q96Q06 1357 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 TIMP1P01033 207 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 ASGR1P07306 291 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 TSPY3P0CV98 308 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 TSPY8P0CW00 308 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 BMP3P12645 472 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 LRRFIP1Q32MZ4 808 aaKnown RBP22.78■■□□□ 1.24
MUC1-211ENST00000438413 SLFN13Q68D06 897 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 ARMCX2Q7L311 632 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 HOMER2Q9NSB8 354 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 TBX21Q9UL17 535 aa22.78■■□□□ 1.24
MUC1-211ENST00000438413 GJA9P57773 515 aa22.77■■□□□ 1.24
MUC1-211ENST00000438413 PDE4BQ07343 736 aa22.77■■□□□ 1.24
MUC1-211ENST00000438413 CCDC144CPQ8IYA2 1237 aa22.77■■□□□ 1.24
MUC1-211ENST00000438413 NEDD1Q8NHV4 660 aa22.77■■□□□ 1.24
MUC1-211ENST00000438413 SEC62Q99442 399 aaKnown RBP22.77■■□□□ 1.24
MUC1-211ENST00000438413 NACAP1Q9BZK3 213 aa22.77■■□□□ 1.24
MUC1-211ENST00000438413 UPF3AQ9H1J1 476 aaKnown RBP22.77■■□□□ 1.24
MUC1-211ENST00000438413 ISY1Q9ULR0 285 aaKnown RBP22.77■■□□□ 1.24
MUC1-211ENST00000438413 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.76■■□□□ 1.23
MUC1-211ENST00000438413 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.76■■□□□ 1.23
MUC1-211ENST00000438413 FDX1P10109 184 aa22.76■■□□□ 1.23
MUC1-211ENST00000438413 CDK7P50613 346 aa22.76■■□□□ 1.23
MUC1-211ENST00000438413 MFSD5Q6N075 450 aa22.76■■□□□ 1.23
MUC1-211ENST00000438413 VTI1AQ96AJ9 217 aa22.76■■□□□ 1.23
MUC1-211ENST00000438413 A0A0U1RQG5 324 aaPredicted RBP22.75■■□□□ 1.23
MUC1-211ENST00000438413 TMEM232C9JQI7 657 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 SLC3A2P08195 630 aaKnown RBP22.75■■□□□ 1.23
MUC1-211ENST00000438413 DNAJB2P25686 324 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 STAT2P52630 851 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 GNASQ5JWF2 1037 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.75■■□□□ 1.23
MUC1-211ENST00000438413 KATNBL1Q9H079 304 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 NAPBQ9H115 298 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 ACAD9Q9H845 621 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 TTC41PQ6P2S7 1318 aa22.75■■□□□ 1.23
MUC1-211ENST00000438413 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
MUC1-211ENST00000438413 TFAP4Q01664 338 aa22.74■■□□□ 1.23
MUC1-211ENST00000438413 CNTN2Q02246 1040 aa22.74■■□□□ 1.23
MUC1-211ENST00000438413 PPARAQ07869 468 aa22.74■■□□□ 1.23
MUC1-211ENST00000438413 ARVCFO00192 962 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 ERC2O15083 957 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 IKQ13123 557 aaPredicted RBP22.73■■□□□ 1.23
MUC1-211ENST00000438413 PPIGQ13427 754 aaKnown RBP eCLIP22.73■■□□□ 1.23
MUC1-211ENST00000438413 GRIN2CQ14957 1233 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 FAM160B2Q86V87 743 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 FAM133AQ8N9E0 248 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 CHURC1Q8WUH1 139 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 FSD1Q9BTV5 496 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 RNF146Q9NTX7 359 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 VCANP13611 3396 aa22.73■■□□□ 1.23
MUC1-211ENST00000438413 CTAGE5O15320 804 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 SLC1A4P43007 532 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 CCDC174Q6PII3 467 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 FAM126BQ8IXS8 530 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 PI4K2BQ8TCG2 481 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 STAG1Q8WVM7 1258 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 CHMP4CQ96CF2 233 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 GMCL1Q96IK5 515 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 AGBL1Q96MI9 1066 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 PPP1R12CQ9BZL4 782 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 A1CFQ9NQ94 594 aaKnown RBP22.72■■□□□ 1.23
MUC1-211ENST00000438413 ZNF536O15090 1300 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 PRUNE2Q8WUY3 3088 aa22.72■■□□□ 1.23
MUC1-211ENST00000438413 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.71■■□□□ 1.23
MUC1-211ENST00000438413 TLR3O15455 904 aaKnown RBP22.71■■□□□ 1.23
MUC1-211ENST00000438413 CSF2RAP15509 400 aa22.71■■□□□ 1.23
MUC1-211ENST00000438413 TNFAIP2Q03169 654 aa22.71■■□□□ 1.23
MUC1-211ENST00000438413 ZMYM1Q5SVZ6 1142 aa22.71■■□□□ 1.23
MUC1-211ENST00000438413 C16orf59Q7L2K0 433 aa22.71■■□□□ 1.23
MUC1-211ENST00000438413 TMEM199Q8N511 208 aa22.71■■□□□ 1.23
MUC1-211ENST00000438413 SOWAHBA6NEL2 793 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 ALAS1P13196 640 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 MCCP23508 829 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 NKX3-2P78367 333 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 BEX3Q00994 111 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 TKFCQ3LXA3 575 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 TMEM240Q5SV17 173 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 NOL8Q76FK4 1167 aaKnown RBP22.7■■□□□ 1.22
MUC1-211ENST00000438413 TIFAQ96CG3 184 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 TRERF1Q96PN7 1200 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 ZNF576Q9H609 170 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 STX8Q9UNK0 236 aa22.7■■□□□ 1.22
MUC1-211ENST00000438413 ASTN1O14525 1302 aa22.69■■□□□ 1.22
MUC1-211ENST00000438413 ASB14A6NK59 587 aa22.69■■□□□ 1.22
MUC1-211ENST00000438413 PPP4R3BQ5MIZ7 849 aa22.69■■□□□ 1.22
MUC1-211ENST00000438413 KCTD1Q719H9 257 aa22.69■■□□□ 1.22
MUC1-211ENST00000438413 OTUD7AQ8TE49 926 aaPredicted RBP22.69■■□□□ 1.22
MUC1-211ENST00000438413 TSPY2A6NKD2 308 aa22.68■■□□□ 1.22
MUC1-211ENST00000438413 PLA2G6O60733 806 aa22.68■■□□□ 1.22
MUC1-211ENST00000438413 ACRP10323 421 aa22.68■■□□□ 1.22
MUC1-211ENST00000438413 RASIP1Q5U651 963 aa22.68■■□□□ 1.22
MUC1-211ENST00000438413 PSRC1Q6PGN9 363 aaPredicted RBP22.68■■□□□ 1.22
MUC1-211ENST00000438413 CCDC129Q6ZRS4 1044 aa22.68■■□□□ 1.22
MUC1-211ENST00000438413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms