RNA–Protein interactions for RNA: ENST00000437072.5

H2AFV-206, Transcript of H2A histone family member V, humanhuman

TSL 4 BASIC

Gene H2AFV, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-206ENST00000437072 NKX3-2P78367 333 aa17.43■□□□□ 0.38
H2AFV-206ENST00000437072 FOXK2Q01167 660 aa17.43■□□□□ 0.38
H2AFV-206ENST00000437072 TMCO2Q7Z6W1 182 aaPredicted RBP17.43■□□□□ 0.38
H2AFV-206ENST00000437072 TTC6Q86TZ1 520 aa17.43■□□□□ 0.38
H2AFV-206ENST00000437072 ZAP70P43403 619 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 SLC9A7Q96T83 725 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 MEIS3Q99687 375 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 TRMT13Q9NUP7 481 aaKnown RBP17.42■□□□□ 0.38
H2AFV-206ENST00000437072 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 TET1Q8NFU7 2136 aa17.42■□□□□ 0.38
H2AFV-206ENST00000437072 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 TCF15Q12870 199 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 PHOSPHO2Q8TCD6 241 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 SUGCTQ9HAC7 445 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 LMCD1Q9NZU5 365 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 MTUS1Q9ULD2 1270 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 ZNF536O15090 1300 aa17.41■□□□□ 0.38
H2AFV-206ENST00000437072 H3BQ06 376 aaPredicted RBP17.4■□□□□ 0.38
H2AFV-206ENST00000437072 WDR46O15213 610 aaKnown RBP17.4■□□□□ 0.38
H2AFV-206ENST00000437072 ZP2Q05996 745 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 MFSD14AQ96MC6 490 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 ABHD16BQ9H3Z7 469 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 FAM86C1Q9NVL1 165 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 PTPRSQ13332 1948 aa17.4■□□□□ 0.38
H2AFV-206ENST00000437072 GFRA3O60609 400 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 PFKMP08237 780 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 AKR1B1P15121 316 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 ARMCX2Q7L311 632 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
H2AFV-206ENST00000437072 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
H2AFV-206ENST00000437072 GNEQ9Y223 722 aaKnown RBP17.39■□□□□ 0.37
H2AFV-206ENST00000437072 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
H2AFV-206ENST00000437072 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 POLR3DP05423 398 aaPredicted RBP17.38■□□□□ 0.37
H2AFV-206ENST00000437072 CYP2D6P10635 497 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 FSCN1Q16658 493 aaKnown RBP17.38■□□□□ 0.37
H2AFV-206ENST00000437072 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
H2AFV-206ENST00000437072 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 MAGEB6Q8N7X4 407 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 NEK9Q8TD19 979 aa17.38■□□□□ 0.37
H2AFV-206ENST00000437072 RIF1Q5UIP0 2472 aaKnown RBP17.37■□□□□ 0.37
H2AFV-206ENST00000437072 CABYRO75952 493 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 ACTN1P12814 892 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 PTPN5P54829 565 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 ICA1Q05084 483 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
H2AFV-206ENST00000437072 NOL8Q76FK4 1167 aaKnown RBP17.37■□□□□ 0.37
H2AFV-206ENST00000437072 PPP1R13LQ8WUF5 828 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 ALG13Q9NP73 1137 aaKnown RBP17.37■□□□□ 0.37
H2AFV-206ENST00000437072 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
H2AFV-206ENST00000437072 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
H2AFV-206ENST00000437072 IRS1P35568 1242 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 RIOK1Q9BRS2 568 aaKnown RBP17.36■□□□□ 0.37
H2AFV-206ENST00000437072 ARHGEF10LQ9HCE6 1279 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 CACNA1BQ00975 2339 aa17.36■□□□□ 0.37
H2AFV-206ENST00000437072 DYNC1LI2O43237 492 aaPredicted RBP17.35■□□□□ 0.37
H2AFV-206ENST00000437072 SMPD1P17405 629 aa17.35■□□□□ 0.37
H2AFV-206ENST00000437072 COPB2P35606 906 aa17.35■□□□□ 0.37
H2AFV-206ENST00000437072 TEX13BQ9BXU2 312 aa17.35■□□□□ 0.37
H2AFV-206ENST00000437072 TNKSO95271 1327 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 DEFB103AP81534 67 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
H2AFV-206ENST00000437072 FTOQ9C0B1 505 aaKnown RBP eCLIP17.34■□□□□ 0.371e-16■■□□□ 11.6
H2AFV-206ENST00000437072 PDGFCQ9NRA1 345 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 MCM9Q9NXL9 1143 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 DNAH14Q0VDD8 3507 aa17.34■□□□□ 0.37
H2AFV-206ENST00000437072 ZFHX4Q86UP3 3567 aa17.33■□□□□ 0.37
H2AFV-206ENST00000437072 LINC01553A4QN01 128 aa17.33■□□□□ 0.36
H2AFV-206ENST00000437072 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
H2AFV-206ENST00000437072 ERVK-21P61565 698 aa17.33■□□□□ 0.36
H2AFV-206ENST00000437072 MTX1Q13505 466 aa17.33■□□□□ 0.36
H2AFV-206ENST00000437072 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
H2AFV-206ENST00000437072 MYO7AQ13402 2215 aa17.33■□□□□ 0.36
H2AFV-206ENST00000437072 WDR5P61964 334 aaKnown RBP17.32■□□□□ 0.36
H2AFV-206ENST00000437072 GPNMBQ14956 572 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 TCTN1Q2MV58 587 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 PUS10Q3MIT2 529 aaKnown RBP17.32■□□□□ 0.36
H2AFV-206ENST00000437072 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 ADHFE1Q8IWW8 467 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 CPXCR1Q8N123 301 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 TGS1Q96RS0 853 aaKnown RBP17.32■□□□□ 0.36
H2AFV-206ENST00000437072 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
H2AFV-206ENST00000437072 CACNA1GO43497 2377 aa17.31■□□□□ 0.36
H2AFV-206ENST00000437072 NAV1Q8NEY1 1877 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms