RNA–Protein interactions for RNA: ENST00000437028.5

SNHG11-208, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 1,169 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-208ENST00000437028 SHHQ15465 462 aa18.28■□□□□ 0.52
SNHG11-208ENST00000437028 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
SNHG11-208ENST00000437028 RWDD1Q9H446 243 aaPredicted RBP18.28■□□□□ 0.52
SNHG11-208ENST00000437028 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
SNHG11-208ENST00000437028 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.28■□□□□ 0.52
SNHG11-208ENST00000437028 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
SNHG11-208ENST00000437028 MROH7Q68CQ1 1323 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 COL6A3P12111 3177 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 TRIM43BA6NCK2 446 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 RAG1P15918 1043 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 TRIM43Q96BQ3 446 aaPredicted RBP18.27■□□□□ 0.52
SNHG11-208ENST00000437028 EVI5LQ96CN4 794 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 TOX2Q96NM4 488 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
SNHG11-208ENST00000437028 LAMA4Q16363 1823 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 DLL1O00548 723 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 KIAA0355O15063 1070 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 PLA2G6O60733 806 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
SNHG11-208ENST00000437028 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 ANKRD33Q7Z3H0 272 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 SH3RF1Q7Z6J0 888 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 KLHDC9Q8NEP7 349 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 LENG1Q96BZ8 264 aaPredicted RBP18.26■□□□□ 0.51
SNHG11-208ENST00000437028 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
SNHG11-208ENST00000437028 ELP1O95163 1332 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
SNHG11-208ENST00000437028 SMAD3P84022 425 aaKnown RBP18.25■□□□□ 0.51
SNHG11-208ENST00000437028 KCNA10Q16322 511 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 C9orf50Q5SZB4 431 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 RNF146Q9NTX7 359 aa18.25■□□□□ 0.51
SNHG11-208ENST00000437028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNHG11-208ENST00000437028 ASB14A6NK59 587 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
SNHG11-208ENST00000437028 MCCP23508 829 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 FPGSQ05932 587 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 RCSD1Q6JBY9 416 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 ANAPC4Q9UJX5 808 aa18.24■□□□□ 0.51
SNHG11-208ENST00000437028 GJA9P57773 515 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 CTDSPL2Q05D32 466 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
SNHG11-208ENST00000437028 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 RNPC3Q96LT9 517 aaKnown RBP18.23■□□□□ 0.51
SNHG11-208ENST00000437028 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
SNHG11-208ENST00000437028 UPF3AQ9H1J1 476 aaKnown RBP18.23■□□□□ 0.51
SNHG11-208ENST00000437028 ORC4O43929 436 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 ASGR1P07306 291 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 ALAS1P13196 640 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 PDE1AP54750 535 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 NUCB1Q02818 461 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 FAAP100Q0VG06 881 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 ALX1Q15699 326 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 KCTD1Q719H9 257 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 DCAF4Q8WV16 495 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 FGD4Q96M96 766 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 FAM161BQ96MY7 647 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 GUCD1Q96NT3 240 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 A1CFQ9NQ94 594 aaKnown RBP18.22■□□□□ 0.51
SNHG11-208ENST00000437028 ZNF536O15090 1300 aa18.22■□□□□ 0.51
SNHG11-208ENST00000437028 MCM3APO60318 1980 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 A0A0U1RQG5 324 aaPredicted RBP18.21■□□□□ 0.51
SNHG11-208ENST00000437028 FOXP2O15409 715 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 TLR3O15455 904 aaKnown RBP18.21■□□□□ 0.51
SNHG11-208ENST00000437028 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 TNFAIP2Q03169 654 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
SNHG11-208ENST00000437028 IL17RBQ9NRM6 502 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 PRR12Q9ULL5 1215 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
SNHG11-208ENST00000437028 TMEM265A0A087WTH1 108 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 MYADML2A6NDP7 307 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 TIMP1P01033 207 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 ITGB8P26012 769 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 PDE4AP27815 886 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 CCDC96Q2M329 555 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 VPS53Q5VIR6 699 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 CCPG1Q9ULG6 757 aa18.2■□□□□ 0.5
SNHG11-208ENST00000437028 ARVCFO00192 962 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms