RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 DNAJC25Q9H1X3 360 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 CAP2P40123 477 aa24.08■■□□□ 1.45
PTPRF-207ENST00000436724 SNAP25P60880 206 aa24.08■■□□□ 1.45
PTPRF-207ENST00000436724 JAKMIP3Q5VZ66 844 aa24.08■■□□□ 1.45
PTPRF-207ENST00000436724 ZNF579Q8NAF0 562 aaKnown RBP24.08■■□□□ 1.45
PTPRF-207ENST00000436724 GMCL1Q96IK5 515 aa24.08■■□□□ 1.45
PTPRF-207ENST00000436724 VWA3AA6NCI4 1184 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 hCG_1984214I3L0E3 225 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 BMP15O95972 392 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 MMP14P50281 582 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 PDILTQ8N807 584 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 ZNF713Q8N859 430 aaPredicted RBP24.08■■□□□ 1.44
PTPRF-207ENST00000436724 EPSTI1Q96J88 318 aa24.08■■□□□ 1.44
PTPRF-207ENST00000436724 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.08■■□□□ 1.44
PTPRF-207ENST00000436724 ESYT2A0FGR8 921 aa24.07■■□□□ 1.44
PTPRF-207ENST00000436724 LMNB1P20700 586 aa24.07■■□□□ 1.44
PTPRF-207ENST00000436724 TNFAIP1Q13829 316 aa24.07■■□□□ 1.44
PTPRF-207ENST00000436724 QRICH1Q2TAL8 776 aa24.07■■□□□ 1.44
PTPRF-207ENST00000436724 REXO1Q8N1G1 1221 aaKnown RBP24.07■■□□□ 1.44
PTPRF-207ENST00000436724 MORC2Q9Y6X9 1032 aaPredicted RBP24.07■■□□□ 1.44
PTPRF-207ENST00000436724 TMEM232C9JQI7 657 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 MAP3K10Q02779 954 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 IKQ13123 557 aaPredicted RBP24.06■■□□□ 1.44
PTPRF-207ENST00000436724 IL17AQ16552 155 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 GLIS2Q9BZE0 524 aaPredicted RBP24.06■■□□□ 1.44
PTPRF-207ENST00000436724 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 FAM13BQ9NYF5 915 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 KIAA1468Q9P260 1216 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 POLR2DO15514 142 aaKnown RBP24.06■■□□□ 1.44
PTPRF-207ENST00000436724 BMP3P12645 472 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 ADCY7P51828 1080 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 ZYXQ15942 572 aaKnown RBP24.06■■□□□ 1.44
PTPRF-207ENST00000436724 LUZP1Q86V48 1076 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 C4orf32Q8N8J7 132 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 FAM200AQ8TCP9 573 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 FERMT2Q96AC1 680 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 TIGD1Q96MW7 591 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 DEFB129Q9H1M3 183 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 TMX2Q9Y320 296 aa24.06■■□□□ 1.44
PTPRF-207ENST00000436724 CDC37Q16543 378 aaPredicted RBP24.05■■□□□ 1.44
PTPRF-207ENST00000436724 C11orf57Q6ZUT1 292 aaPredicted RBP24.05■■□□□ 1.44
PTPRF-207ENST00000436724 KRT25Q7Z3Z0 450 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 TRPM4Q8TD43 1214 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 PHF20L1A8MW92 1017 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 MSNP26038 577 aaKnown RBP24.05■■□□□ 1.44
PTPRF-207ENST00000436724 NONOQ15233 471 aaKnown RBP eCLIP24.05■■□□□ 1.44
PTPRF-207ENST00000436724 KRBA2Q6ZNG9 492 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 SYMPKQ92797 1274 aaKnown RBP24.05■■□□□ 1.44
PTPRF-207ENST00000436724 SYT17Q9BSW7 474 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 CBX8Q9HC52 389 aa24.05■■□□□ 1.44
PTPRF-207ENST00000436724 A0A087X0B3 334 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 H7C1D1 291 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 UBE2SQ16763 222 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 CNNM3Q8NE01 707 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 TBCKQ8TEA7 893 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 TMEM60Q9H2L4 133 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 USP25Q9UHP3 1055 aa24.04■■□□□ 1.44
PTPRF-207ENST00000436724 BIN1O00499 593 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 FOXN1O15353 648 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 PNOCQ13519 176 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 LETM2Q2VYF4 491 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 PRAMEF18Q5VWM3 479 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 SBF1O95248 1867 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 ZNF165P49910 485 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 STX1AQ16623 288 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 UVSSAQ2YD98 709 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 NBPF12Q5TAG4 269 aaPredicted RBP24.03■■□□□ 1.44
PTPRF-207ENST00000436724 GPRC5DQ9NZD1 345 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 PCDHA1Q9Y5I3 950 aa24.03■■□□□ 1.44
PTPRF-207ENST00000436724 TAL1P17542 331 aaPredicted RBP24.02■■□□□ 1.44
PTPRF-207ENST00000436724 ANGEL2Q5VTE6 544 aaKnown RBP24.02■■□□□ 1.44
PTPRF-207ENST00000436724 RIC8AQ9NPQ8 531 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 SERTAD1Q9UHV2 236 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 DICER1Q9UPY3 1922 aaKnown RBP24.02■■□□□ 1.44
PTPRF-207ENST00000436724 CCNT1O60563 726 aaKnown RBP24.02■■□□□ 1.44
PTPRF-207ENST00000436724 EPS15P42566 896 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 FAM83BQ5T0W9 1011 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 SYDE2Q5VT97 1194 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 PPP1R18Q6NYC8 613 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 GPC2Q8N158 579 aa24.02■■□□□ 1.44
PTPRF-207ENST00000436724 ASNSP08243 561 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 ISM2Q6H9L7 571 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 NEK8Q86SG6 692 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 GOPCQ9HD26 462 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 SYNPO2Q9UMS6 1093 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 YBX3P16989 372 aaKnown RBP eCLIP24.01■■□□□ 1.434e-7■□□□□ 8.4
PTPRF-207ENST00000436724 PLCB2Q00722 1185 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 PSTPIP2Q9H939 334 aa24.01■■□□□ 1.43
PTPRF-207ENST00000436724 AP5Z1O43299 807 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 CDC25AP30304 524 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 GRAMD1CQ8IYS0 662 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 CUL5Q93034 780 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 PRR12Q9ULL5 1215 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 FZD1Q9UP38 647 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 ATAD5Q96QE3 1844 aa24■■□□□ 1.43
PTPRF-207ENST00000436724 HIRAP54198 1017 aaPredicted RBP23.99■■□□□ 1.43
PTPRF-207ENST00000436724 DPCR1Q3MIW9 517 aa23.99■■□□□ 1.43
PTPRF-207ENST00000436724 USH1GQ495M9 461 aa23.99■■□□□ 1.43
PTPRF-207ENST00000436724 ARL6IP4Q66PJ3 421 aaKnown RBP23.99■■□□□ 1.43
PTPRF-207ENST00000436724 BTNL9Q6UXG8 535 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms