RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 BZW2Q9Y6E2 419 aaKnown RBP12.24□□□□□ -0.45
SCN4A-201ENST00000435607 CUL7Q14999 1698 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 NDUFAB1O14561 156 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 EFCAB14O75071 495 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 PTK2BQ14289 1009 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 ARMCX5Q6P1M9 558 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 IP6K1Q92551 441 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 NEUROG2Q9H2A3 272 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 GPAA1O43292 621 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
SCN4A-201ENST00000435607 ADALQ6DHV7 355 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 FGD4Q96M96 766 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 RUNDC3BQ96NL0 473 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 STX2P32856 288 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 MIS18BP1Q6P0N0 1132 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
SCN4A-201ENST00000435607 TRIM42Q8IWZ5 723 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 SPATA5Q8NB90 893 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 PCDHA12Q9UN75 941 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 NNMTP40261 264 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 GNAT1P11488 350 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 RAD51AP2Q09MP3 1159 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 DRC3Q9H069 523 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 EVI5O60447 810 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 AK2P54819 239 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 TFAP4Q01664 338 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 SYNJ2BP-COX16A0A087WUM0 186 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 ZNF18P17022 549 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 ADCY8P40145 1251 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 ARHGAP25P42331 645 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 NLRP7Q8WX94 980 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 COX16Q9P0S2 106 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 H7C0C1 242 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 GSTA4O15217 222 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 ATP5OP48047 213 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 RGS16O15492 202 aaPredicted RBP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 CSPG5O95196 566 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 MYO1EQ12965 1108 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 CCDC13Q8IYE1 715 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 MAPK8IP1Q9UQF2 711 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 COL4A3BPQ9Y5P4 624 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 BFSP1Q12934 665 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 SYT10Q6XYQ8 523 aa12.23□□□□□ -0.45
SCN4A-201ENST00000435607 FTOQ9C0B1 505 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 METTL14Q9HCE5 456 aaKnown RBP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
SCN4A-201ENST00000435607 KDRP35968 1356 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 LRMPQ12912 555 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 GALNT17Q6IS24 598 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 HOMER3Q9NSC5 361 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 MOSPD1Q9UJG1 213 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 MED7O43513 233 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 TTBK2Q6IQ55 1244 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 ARMCX2Q7L311 632 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 SLC7A3Q8WY07 619 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 TRIM11Q96F44 468 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 LRRC4Q9HBW1 653 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 SOS2Q07890 1332 aaPredicted RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 THOC5Q13769 683 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 PTK2Q05397 1052 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 WASHC5Q12768 1159 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 PDCD7Q8N8D1 485 aaKnown RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 RPS6KB1P23443 525 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 TTI1O43156 1089 aa12.22□□□□□ -0.45
SCN4A-201ENST00000435607 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
SCN4A-201ENST00000435607 ARPP19P56211 112 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms