RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 GRM8O00222 908 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 CTDNEP1O95476 244 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 YEATS4O95619 227 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SSBP05455 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PHEXP78562 749 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 TTC30BQ8N4P2 665 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 KCNG4Q8TDN1 519 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PPP2R3CQ969Q6 453 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SLC39A3Q9BRY0 314 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 FTOQ9C0B1 505 aaKnown RBP eCLIP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 NOP53Q9NZM5 478 aaKnown RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PCDHA7Q9UN72 937 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 DAAM1Q9Y4D1 1078 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 AFDNP55196 1824 aaKnown RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 DYTNA2CJ06 578 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 NPTXRO95502 500 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 GNAQP50148 359 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
GARNL3-205ENST00000435213 LRRC49Q8IUZ0 686 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 MYO1HQ8N1T3 1032 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 IGSF22Q8N9C0 903 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SMC1BQ8NDV3 1235 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 LINS1Q8NG48 757 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SEL1LQ9UBV2 794 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 ATP6V0A2Q9Y487 856 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 NEDD4P46934 1319 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 CYP21A2P08686 494 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SH3BGRP55822 239 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 GNGT1P63211 74 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 FANCCQ00597 558 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 NCAPHQ15003 741 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 INAQ16352 499 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PARP10Q53GL7 1025 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ILDR1Q86SU0 546 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 RSPH3Q86UC2 560 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 FAM228AQ86W67 206 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SLC43A3Q8NBI5 491 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF653Q96CK0 615 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SUCLG2Q96I99 432 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ZCWPW1Q9H0M4 648 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 VCX3BQ9H321 246 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 VCX3AQ9NNX9 186 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 DDX25Q9UHL0 483 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 RGPD2P0DJD1 1756 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 CARMIL3Q8ND23 1372 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 A0A087WWV3 80 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 A0A1B0GVG6 124 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PALM3A6NDB9 673 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 BIN1O00499 593 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PRPF6O94906 941 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PSMC4P43686 418 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 NLRP5P59047 1200 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 EIF2B5Q13144 721 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 USH1GQ495M9 461 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 MSANTD4Q8NCY6 345 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ANKRD27Q96NW4 1050 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 RABEP2Q9H5N1 569 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PREBQ9HCU5 417 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 CIDEBQ9UHD4 219 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SH3TC1Q8TE82 1336 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ADAMTS7Q9UKP4 1686 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 LRRIQ3A6PVS8 624 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 NDUFA8P51970 172 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 OXCT1P55809 520 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PDE4BQ07343 736 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 DMPKQ09013 629 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 MCMDC2Q4G0Z9 681 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PABPC1LQ4VXU2 614 aaKnown RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 UBE2Q1Q7Z7E8 422 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PIAS4Q8N2W9 510 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF280CQ8ND82 737 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 NR1H4Q96RI1 486 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-205ENST00000435213 POLR3EQ9NVU0 708 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 PRELID1Q9Y255 219 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 SPO11Q9Y5K1 396 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 C4AP0C0L4 1744 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
GARNL3-205ENST00000435213 ARHGAP6O43182 974 aa8.1□□□□□ -1.11
GARNL3-205ENST00000435213 VIMP08670 466 aaKnown RBP8.1□□□□□ -1.11
GARNL3-205ENST00000435213 KCNA6P17658 529 aa8.1□□□□□ -1.11
GARNL3-205ENST00000435213 GUCY1B3Q02153 619 aa8.1□□□□□ -1.11
GARNL3-205ENST00000435213 PTK7Q13308 1070 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms