RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 TNFRSF25Q93038 417 aa13.71□□□□□ -0.21
SEMA3F-206ENST00000434342 UBXN6Q9BZV1 441 aa13.71□□□□□ -0.21
SEMA3F-206ENST00000434342 GDAQ9Y2T3 454 aa13.71□□□□□ -0.21
SEMA3F-206ENST00000434342 COL4A1P02462 1669 aa13.71□□□□□ -0.21
SEMA3F-206ENST00000434342 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 PP2D1A8MPX8 630 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 PFKFB3Q16875 520 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ORC4O43929 436 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 TADA3O75528 432 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 PCP11498 1178 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 STAT6P42226 847 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 TGFBRAP1Q8WUH2 860 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ARPP21Q9UBL0 812 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 TXLNAP40222 546 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ZNF444Q8N0Y2 327 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 MTRQ99707 1265 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 ANKRD2Q9GZV1 360 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
SEMA3F-206ENST00000434342 LDHBP07195 334 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 FGRP09769 529 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 FXR1P51114 621 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 PPP2R3AQ06190 1150 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 INF2Q27J81 1249 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 NELFBQ8WX92 580 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 CTAGE1Q96RT6 745 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 A0A087WUV0 522 aaPredicted RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 SEMA3EO15041 775 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 PEX19P40855 299 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 MIEF2Q96C03 454 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 KRT31Q15323 416 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 IL17RBQ9NRM6 502 aa13.69□□□□□ -0.22
SEMA3F-206ENST00000434342 PAK1Q13153 545 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 GRIK5Q16478 980 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 CALML3P27482 149 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 UBA7P41226 1012 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 SSR1P43307 286 aaKnown RBP13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 ACRBPQ8NEB7 543 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 BORCS6Q96GS4 357 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 ADGRG1Q9Y653 693 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 LRP5O75197 1615 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 KIF5CO60282 957 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 INHBEP58166 350 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 SLC10A5Q5PT55 438 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
SEMA3F-206ENST00000434342 GTPBP6O43824 516 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 MFAP3LO75121 409 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 GYPCP04921 128 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 PANX2Q96RD6 677 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 PSD3Q9NYI0 1048 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 ANKRD36CQ5JPF3 1778 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 ELF1P32519 619 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 PRCPP42785 496 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 CCT5P48643 541 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 UBXN1Q04323 297 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 NFIXQ14938 502 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 PDXDC2PQ6P474 469 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms