RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 MFSD14AQ96MC6 490 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 LGR4Q9BXB1 951 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 MCM8Q9UJA3 840 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 MAPRE3Q9UPY8 281 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 B4E1Z4 1266 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 AQP7O14520 342 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 TBX1O43435 398 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 PDE8AO60658 829 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 VAMP4O75379 141 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 RASSF7Q02833 373 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 CBX2Q14781 532 aaPredicted RBP8.27□□□□□ -1.09
USP54-206ENST00000433394 RNF43Q68DV7 783 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 CNNM4Q6P4Q7 775 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 USP53Q70EK8 1073 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 SYTL4Q96C24 671 aaPredicted RBP8.27□□□□□ -1.09
USP54-206ENST00000433394 MAGEB10Q96LZ2 347 aaPredicted RBP8.27□□□□□ -1.09
USP54-206ENST00000433394 CEP89Q96ST8 783 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 GPR62Q9BZJ7 368 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 BACE2Q9Y5Z0 518 aa8.27□□□□□ -1.09
USP54-206ENST00000433394 C1QTNF9BB2RNN3 333 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 H0Y8X5 98 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 OPA1O60313 960 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 DLX3O60479 287 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 GDF11O95390 407 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 CHRNA4P43681 627 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 PCBP3P57721 371 aaKnown RBP8.26□□□□□ -1.09
USP54-206ENST00000433394 TNK2Q07912 1038 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 TRIM61Q5EBN2 209 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 UBE2R2Q712K3 238 aaPredicted RBP8.26□□□□□ -1.09
USP54-206ENST00000433394 ZNF765Q7L2R6 523 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 CD163Q86VB7 1156 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 Q96M66 194 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 DBNDD2Q9BQY9 259 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 MKNK2Q9HBH9 465 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 CAPN6Q9Y6Q1 641 aa8.26□□□□□ -1.09
USP54-206ENST00000433394 TRBV23OR9-2A0A075B6M9 112 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 C2orf71A6NGG8 1288 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 SCG5P05408 212 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 STAT3P40763 770 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 SCRN1Q12765 414 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 IQCEQ6IPM2 695 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 LRRTM3Q86VH5 581 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 TMEM145Q8NBT3 493 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
USP54-206ENST00000433394 SSBP4Q9BWG4 385 aaPredicted RBP8.25□□□□□ -1.09
USP54-206ENST00000433394 STXBP3O00186 592 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 MEFVO15553 781 aaPredicted RBP8.24□□□□□ -1.09
USP54-206ENST00000433394 KCNQ2O43526 872 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 ASLP04424 464 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 BMP8BP34820 402 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 ADMP35318 185 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 NEK4P51957 841 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 NFKB2Q00653 900 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 CDKAL1Q5VV42 579 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 EEF1DP3Q658K8 133 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 CRTC3Q6UUV7 619 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 MTDHQ86UE4 582 aaKnown RBP8.24□□□□□ -1.09
USP54-206ENST00000433394 HEXIM2Q96MH2 286 aaKnown RBP8.24□□□□□ -1.09
USP54-206ENST00000433394 HDAC8Q9BY41 377 aa8.24□□□□□ -1.09
USP54-206ENST00000433394 FAM170BA6NMN3 283 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 RAB11FIP3O75154 756 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 LTKP29376 864 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 IGFALSP35858 605 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 CLCN7P51798 805 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 AMPD3Q01432 767 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 NFIAQ12857 509 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 E4F1Q66K89 784 aaPredicted RBP8.23□□□□□ -1.09
USP54-206ENST00000433394 RSPO2Q6UXX9 243 aaPredicted RBP8.23□□□□□ -1.09
USP54-206ENST00000433394 DDX46Q7L014 1031 aaKnown RBP8.23□□□□□ -1.09
USP54-206ENST00000433394 BRAPQ7Z569 592 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 THNSL2Q86YJ6 484 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 GATA6Q92908 595 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 TCTN2Q96GX1 697 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 ST14Q9Y5Y6 855 aa8.23□□□□□ -1.09
USP54-206ENST00000433394 PRR33A8MZF0 331 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 AURKAO14965 403 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 TPP2P29144 1249 aaPredicted RBP8.22□□□□□ -1.09
USP54-206ENST00000433394 KCNAB2Q13303 367 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 FAM214BQ7L5A3 538 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 TSPYL5Q86VY4 417 aaPredicted RBP8.22□□□□□ -1.09
USP54-206ENST00000433394 NAT16Q8N8M0 369 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
USP54-206ENST00000433394 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 LRRC4CQ9HCJ2 640 aa8.22□□□□□ -1.09
USP54-206ENST00000433394 TYW1Q9NV66 732 aaKnown RBP8.22□□□□□ -1.09
USP54-206ENST00000433394 MYO1BO43795 1136 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 NPTXRO95502 500 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 CAPNS1P04632 268 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 SYPP08247 313 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 GSTM1P09488 218 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms